Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0993 ATGGGGTTTAGATGGAACCGATTTGGATTATGGTTCAAAATATGTATTGTCTTAATTTCTTCGTGGCAAATTCCAGTGTCTTGGTCCCTGAACGACGAAGGGTTAGCCTTGTTGGAATTCCGAGATAGAATAGTGTTTGATCCTTATGGAGCCTTCATGAATTGGAATCCAAATGATGGTGACCCTTGCAATTGGTTCGGTGTTCATTGCATTGACAGTAAAGTTCAAATTCTTGACTTAAACTCCTTATCTTTGGGAGGGACATTGGCCCCGGAGCTTGGGAAGCTTAGTCACTTAAAATCTCTTTTGTTGTGCAAGAACAATCTCTCTGGAACCATTCCCAAGGAATTTGGAGGGTTGGCCAAACTTGAGTTATTGGATTTGAGGGACAATAACTTTACTGGAAGTATTCCAGTGGAAATTAGCTGTTTATCAGAACTAAAATATTTGTTGCTGTGTGGCAATAAAATTGAAGTCCATGTTTGTCAAGATGTTGAAAAGCCCAGATTACCCTCTAAATGGTTATTTGTCGACAAGTGTACTTCACCAATGACATCTGTTTTCGGTGGCTTGAATAGAAAATTTGGAAATTGGTTGAAGCTAGATAAAGCTGTTGATGTTTGTCAAGCCAATTTCTATCACAATCAACATGACTTTCATGAGCCTGGGATTGCCCAAACTATGCCAAACCTCATCAATTCTGCACGTCGCAAGTTACTTGATCAATCTAGCAACCTTGCAGCTATACCTATCAGTATTGTTCTTACTAAACCTGTTGTTCCTTTTCCAACAACCTTGAGCAGTGGAGCTTTTCCTGCTGTACCACGTGAGGAGCAAAAAGATATATCACCTGCACCACCTCCAACTGTTAATTTTCTGCCCAATGCTCCAAATCAAGACCAATCTCCTACTGAACAAAAACATTCAACTAAAGGAATTTCTAAACATTTGTGGCTTTATATAATAATTATTTTTTTGTTTTTTGTTGTACTGGTAATTATTGCTGTGGCTATATTTTGTTTTTGGCGAGTACAAGCGGCCAAAACAGTAAGCCCCTGGAAAACAGGAATAAGTGGACAACTACAAAAGGCATTTGTATCAGGAGTTCCCAAGCTGAATCGATCAGAGCTGGAGACAGCCTGTGAGGATTTCAGCAATATTATTGATACTCTCGATGATCACACCATATACAAAGGAACACTATCTAATGGAGTTGAGATTGCTGTTGTTTCTACTACTGTCACTTCTTCCAAAGAATGGTCAAAGAATGCAGAGATGTTCTACAGGGAACAGATCAGTTCATTGTCTCGTGTGAACCATAAGAACTTTATCAATCTTATTGGCTTTTGTGAAGAAGAAAAACCATTCACCAGGATGATGGTTTTTGAGTATGCATCTAATGGTTCCTTGTTTGAGAATCTCCATGTTAAGGAAGATGAACCTCTTAATTGGATAACAAGGACCAGGATTATTATGGGAATCGCTTATTGTTTGCGGTACATGCATGATCTAAATCCACCAGTATCTCCACCCATCCTTACTTCATCTTCTATTTATTTAACGGAAGATCTTGCTGCTAAGGTAGCAGGTATTAATTTTGATAAGTCATTCATACAAGAAGATAAGTCAACTGAAGAAAAGGGGTCTAGCCATTCTCAGCTGTCACCCAATGTAAATCTCGAAACAAATGTTTATAATTTTGGTAAAGTCTTGCTTGAAATAATTTCAAGAAAACCCCCATACTCTGAAGAACAAGGTCATCTCATCGAATTGGCTGCTGATCACATCAAAAGCAACAAAAGCATCAATTATATGATTGATCCCATTCTACGATCATATGAAAATGATCAACTTGATGTGATTTGTGAAGTAATACAAGATTGCTTACAGAGTGATCCAAAGTTAAGGCCTACAATGGAGGATGTAGTTTCTAAATTGCGGGGAGTCATTAGTATATCACCTGAACAAGCAGTTCCAGGTGTTTCTGCTTTTTGGTGGGCAGAGTTGGAAATACTATCCCTTGAGGCTAATTAA 2034 0.384 MGFRWNRFGLWFKICIVLISSWQIPVSWSLNDEGLALLEFRDRIVFDPYGAFMNWNPNDGDPCNWFGVHCIDSKVQILDLNSLSLGGTLAPELGKLSHLKSLLLCKNNLSGTIPKEFGGLAKLELLDLRDNNFTGSIPVEISCLSELKYLLLCGNKIEVHVCQDVEKPRLPSKWLFVDKCTSPMTSVFGGLNRKFGNWLKLDKAVDVCQANFYHNQHDFHEPGIAQTMPNLINSARRKLLDQSSNLAAIPISIVLTKPVVPFPTTLSSGAFPAVPREEQKDISPAPPPTVNFLPNAPNQDQSPTEQKHSTKGISKHLWLYIIIIFLFFVVLVIIAVAIFCFWRVQAAKTVSPWKTGISGQLQKAFVSGVPKLNRSELETACEDFSNIIDTLDDHTIYKGTLSNGVEIAVVSTTVTSSKEWSKNAEMFYREQISSLSRVNHKNFINLIGFCEEEKPFTRMMVFEYASNGSLFENLHVKEDEPLNWITRTRIIMGIAYCLRYMHDLNPPVSPPILTSSSIYLTEDLAAKVAGINFDKSFIQEDKSTEEKGSSHSQLSPNVNLETNVYNFGKVLLEIISRKPPYSEEQGHLIELAADHIKSNKSINYMIDPILRSYENDQLDVICEVIQDCLQSDPKLRPTMEDVVSKLRGVISISPEQAVPGVSAFWWAELEILSLEAN 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0993 677 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Mibi03g0993 677 ProSiteProfiles Protein kinase domain profile. 347 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0993 677 MobiDBLite consensus disorder prediction 294 308 - -
Mibi03g0993 677 Pfam Leucine rich repeat 97 157 IPR001611 GO:0005515
Mibi03g0993 677 FunFam Leucine-rich repeat receptor-like kinase 34 170 - -
Mibi03g0993 677 Gene3D Ribonuclease Inhibitor 29 180 IPR032675 -
Mibi03g0993 677 PANTHER PROTEIN MALE DISCOVERER 2 18 674 - -
Mibi03g0993 677 FunFam Inactive receptor-like serine/threonine-protein kinase 356 464 - -
Mibi03g0993 677 Gene3D Transferase(Phosphotransferase) domain 1 465 657 - -
Mibi03g0993 677 SUPERFAMILY Protein kinase-like (PK-like) 394 646 IPR011009 -
Mibi03g0993 677 MobiDBLite consensus disorder prediction 277 308 - -
Mibi03g0993 677 Pfam Protein tyrosine and serine/threonine kinase 396 646 IPR001245 GO:0004672|GO:0006468
Mibi03g0993 677 SUPERFAMILY L domain-like 30 158 - -
Mibi03g0993 677 Gene3D Phosphorylase Kinase; domain 1 358 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0993 Mibi-ChrMibi03 20183567 20188023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0993 10 651 Receptor kinase-like Gene Family AT1G66830 24.454 2.11e-38 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Mibi03g0993 PK_Tyr_Ser-Thr 1.3e-16 CL0016