Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0968 ATGGATTCAGAACAAAGGGAGGAGAAGAAAGGAACAATCTTGATGCAAAAATACGAGCTGGGTTGTTTACTGGGTCAAGGCACATTCGCCAAAGTCTATTACGCCAAGAACATCGAAACAAACCAGAGCGTCGCCATTAAAGTAATCAACGGACAGAAAATCCAAAGAATCGGCTTAATCGAACAAATCAAGCGCGAGATCTCTGTCATGAACATGGTACGGCACCCCAACATCGTTCACCTCCACGAAGTAATGGCAAACAAGAACAAGATCTACTTCGCTATGGAGTATGTTAAAGGAGGTGAACTTTTTGCAAAGGTAGCTAAAGGGAAACTGAAGGAGGATTTGGCACGAAAGTATTTCCAACAGCTAATTTGTGCTGTTGATTTTTGCCATAGCAGAGGGGTTTATCATAGAGATCTGAAGCCTGAGAATCTGCTTCTGGATGAAAATGGGGATTTGAAGATTTCTGATTTTGGGTTAAGTGCTTTTTATGAACCTAGAAAGAATGATGGTCTTTTGTTTACAACTTGTGGAACACCAGCTTATGTGGCACCTGAAGTTCTTAACAGGAAAGGTTATGATGGAGCTAAATCTGATGTTTGGTCTTGTGGGGTTATTCTGTTTGTTCTTCTTGCAGGTTTTCTTCCATTTCAGAATAAGAATTTGATTGAGATGTATAGGAAGATTAGTACTGCAGATTTCAAGTGTCCTAGATGGTTCTCACCTCAAATAAGAAGGCTTGTAACTAGAATTCTTGATCCAAATCCAAGAACAAGAGTAAGTGTTGCTAACATTATGGAAAATGACTGGTTTAAAATTGGGTATCAGCAGATTGAACCACACGAATCACCGGTTTCGAATCCTGAGAGTGATGTTCGGGCTGTTCTTGATTTTCCTTCATCATCATCATCAAGTACAGAGGAAGAAATCAAAGAATCCTCAATGAGAGTGAAACCATCTGCCTTCAATGCTTTTCATTTAATATCACTTTCTTCGGGGTTTGATCTCTCTGGTTTGTTTGAGGAAGATAAATGTAGGAGAAAACATGCTAGATTCACCACTCAAAAGCCGGCCTCGACGATCGTGTCGAAACTGGAAGAAATAGCAGAGGCAGATAGGAAATTCAGGGTTGTGAAGAAAGATGGATTGGTGAGATTGGAGGGAAGCAAGATAGGTAGGAAGGGACAACTTGGAATTGATGCAGAGATTTTTGAGGTGACATCAACTTTTCATATTGTGGAAGTGAAGAAAACTTCAGGTGATACGTTTGAGTATATACAGTTTAGGGATCAGAATTTGAAGCCTTCATTGAGGGATATAGTGTGGGCTTGGCCAGGAGGTGAGCAATAG 1353 0.4043 MDSEQREEKKGTILMQKYELGCLLGQGTFAKVYYAKNIETNQSVAIKVINGQKIQRIGLIEQIKREISVMNMVRHPNIVHLHEVMANKNKIYFAMEYVKGGELFAKVAKGKLKEDLARKYFQQLICAVDFCHSRGVYHRDLKPENLLLDENGDLKISDFGLSAFYEPRKNDGLLFTTCGTPAYVAPEVLNRKGYDGAKSDVWSCGVILFVLLAGFLPFQNKNLIEMYRKISTADFKCPRWFSPQIRRLVTRILDPNPRTRVSVANIMENDWFKIGYQQIEPHESPVSNPESDVRAVLDFPSSSSSSTEEEIKESSMRVKPSAFNAFHLISLSSGFDLSGLFEEDKCRRKHARFTTQKPASTIVSKLEEIAEADRKFRVVKKDGLVRLEGSKIGRKGQLGIDAEIFEVTSTFHIVEVKKTSGDTFEYIQFRDQNLKPSLRDIVWAWPGGEQ 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0968 450 ProSiteProfiles NAF domain profile. 318 342 IPR018451 GO:0007165
Mibi03g0968 450 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 426 - -
Mibi03g0968 450 FunFam Non-specific serine/threonine protein kinase 12 314 - -
Mibi03g0968 450 Pfam NAF domain 320 379 IPR004041 GO:0007165
Mibi03g0968 450 FunFam Non-specific serine/threonine protein kinase 318 443 - -
Mibi03g0968 450 Gene3D Kinase associated domain 1, KA1 318 444 - -
Mibi03g0968 450 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0968 450 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Mibi03g0968 450 CDD STKc_SnRK3 17 271 - -
Mibi03g0968 450 Gene3D Phosphorylase Kinase; domain 1 11 102 - -
Mibi03g0968 450 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Mibi03g0968 450 Gene3D Transferase(Phosphotransferase) domain 1 103 277 - -
Mibi03g0968 450 SUPERFAMILY Protein kinase-like (PK-like) 14 330 IPR011009 -
Mibi03g0968 450 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0968 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Mibi03g0968 450 Pfam Protein kinase domain 19 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0968 450 CDD CIPK_C 324 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0968 Mibi-ChrMibi03 19421199 19422551 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0968 8 447 CBL-interacting serine-threonine protein kinases AT5G45820 63.371 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mibi03g0968 Pkinase 1.2e-73 CL0016