Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0937 ATGGATGAAGCACAGGTTGGTTCTGGTTCCTTGCCTCCTTTCTTGGCAAAGACATATGAAATGGTTGAGGATCCTTCCTCGGATTCCGTTGTTTCTTGGAGTAACTCTAATAAAAGTTTTGTAGTATGGGATCCGACAGAATTTGCAAGGGATTTGCTTCCAAGATTCTTTAAGCATAGTAACTTCTCAAGTTTCATCAGGCAGCTAAACACTTATGGTTTTAAAAAGATTGACCCGGAACGGTGGGAATTTGCGAATGATGATTTTATAAGGGGTCAACCACATCTTTTGAAGAGTATCCATAGGAGAAAACCAGTTCATAGCCATTCTTTACCGAATCAGCAGGGACAAGGAGGTTCTTCATTATCTGAATCAGAAAGGCAGAATTTCAGAGATCAAATTATGAGGCTTAAACAAGAGAAAGAAGTGCTTGCTTTAGATTTACAGAGATATGAACAGGAATTGAAATCTTGTGAGATACAAATACATTGCTCAAACAGCCGATTGGAAAATTTTGAACAGAAGCAACAAAAGATGGTCTCTTCACTTTCTCAAGCATTGCAAAAGCCTGGGGTTGTTTTAAATCTCTGTTCACTTTCGGAATCCCCGGATAGAAAACGAAGATTTCCGAGGGGCGGGTCCTTTTGTGATGAAGCTAGCATTGAAGATCCTATGGAGACTTCCCAAATTTCACCTAGAGAAGTCTCTATAATAATATCGAACGTGGAGCGATCGAATCAGCTGGAATCATCTCTGTTATTCTGGGAGAGCATTGCAATAGAAGTTGGTGATAATTTTGTTCAAAGTTCTTCAAACTTGGACTTTGATGAGTCTACAAGTTGTCCTGATAGTCCAACTATATCGTGTGTGCAATTAGATATTGAAATTCAGCCAAAGTCTTCTGGAATCGACATGAATGCTGAGCCTGCTGTATCTGCTGCTCCTGAGGCTGTTACATCAAAAGAACAAGTAGTGGAAACGACCGCCGTGGCGACTGGTCATAATGATGTCTTCTGGGAACAGTTCTTGACAGAAAATCCTGGTTCATCAGAGTCACAAGAGGTGCAGATGGAAGTGAAGGATTCTGATGCCAGAAAGAATGAAGGGAAACCAATGGAAGTAAATAAATATTGGTGGAATGTGCGGAATGGTAATAATCTTCCAGAACAGATTGGGCATCTTGGTCAAGCAGAGAAAACTTAG 1203 0.4048 MDEAQVGSGSLPPFLAKTYEMVEDPSSDSVVSWSNSNKSFVVWDPTEFARDLLPRFFKHSNFSSFIRQLNTYGFKKIDPERWEFANDDFIRGQPHLLKSIHRRKPVHSHSLPNQQGQGGSSLSESERQNFRDQIMRLKQEKEVLALDLQRYEQELKSCEIQIHCSNSRLENFEQKQQKMVSSLSQALQKPGVVLNLCSLSESPDRKRRFPRGGSFCDEASIEDPMETSQISPREVSIIISNVERSNQLESSLLFWESIAIEVGDNFVQSSSNLDFDESTSCPDSPTISCVQLDIEIQPKSSGIDMNAEPAVSAAPEAVTSKEQVVETTAVATGHNDVFWEQFLTENPGSSESQEVQMEVKDSDARKNEGKPMEVNKYWWNVRNGNNLPEQIGHLGQAEKT 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0937 400 MobiDBLite consensus disorder prediction 109 128 - -
Mibi03g0937 400 Coils Coil 127 168 - -
Mibi03g0937 400 SUPERFAMILY "Winged helix" DNA-binding domain 10 103 IPR036390 -
Mibi03g0937 400 FunFam Heat shock transcription factor 1 7 104 - -
Mibi03g0937 400 SMART hsfneu3 10 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi03g0937 400 MobiDBLite consensus disorder prediction 104 128 - -
Mibi03g0937 400 ProSitePatterns HSF-type DNA-binding domain signature. 53 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi03g0937 400 MobiDBLite consensus disorder prediction 346 368 - -
Mibi03g0937 400 Gene3D - 8 104 IPR036388 -
Mibi03g0937 400 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 9 232 IPR027725 -
Mibi03g0937 400 Pfam HSF-type DNA-binding 14 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi03g0937 400 PRINTS Heat shock factor (HSF) domain signature 65 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi03g0937 400 PRINTS Heat shock factor (HSF) domain signature 14 37 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi03g0937 400 PRINTS Heat shock factor (HSF) domain signature 52 64 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0937 Mibi-ChrMibi03 18736487 18737826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0937 1 400 HSF AT4G18880 50.602 2.80e-118 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mibi03g0937 HSF_DNA-bind 3.4e-32 CL0123