Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0930 ATGAACTTCTTTGCTTTTTTCCTAATTATTGTGTTGAGTTCTTTCAGATATGCAGAATCTAAGCTCCCCCAAGAAGAAGTTGATGCTCTTCGAGAAATTGTTAGTACAATGGGTAGCACTTACTGGAAGTTTGATGGCGACTCTTGCCAGATTGAAACGGTGGGATTGACACCAGTGCCATCTAGTGGATCACAGAGCAGCATTGGTTGTCAATGTTTTGCCGAAAATGGCACTAACTGTCATGTTGTGAGCATTTTGCTCAAGGGGTACAGCCTACCTGGCATGCTTCCACCTCAACTGGTCAAGCTTCCTTACCTTAAAGAAGTGGATTTTGCTTTGAATTACCTAAACGGTACAATCCCTAAGGAATGGATTTCAACGAAATTATCTTCAATCTCTCTTCTTGTGAATCGCTTATCAGGAGAAATTCCTAAGGAGCTTGGAAAGATGACCTCTCTAACATTCCTGAACCTTGAAGCAAACCAATTTTCTGGTCTTGTGCCCCGTGAGCTTGGAAATCTGATTAACCTGCAGACTTTGTTTCTGTCATCCAATAAATTTTCAGGACATATACCAGAAACATTTGCTCAATTAAAGAATTTGACAGATTTTAGGATAAATGATAACAATTTCAGTGGAACAATACCTAATTTCATCCAGAATTGGAAGCCACTTCAAAGACTAGAAATGCATGGAAGTGGGCTTGAAGGACCCATCCCATCAAATATATCTCTTCTAAGTAATTTACTGCAATTTGACATAGCTGGTCCAAGTCAGGATTTTCCTTCCCTAAGCAATATGACAGCATTGATAAGATTGGTTTTGAGAAATTGCAATATTACTGGAGAGCTACCTACCTACGTCTGGACGATGCAGGACTTGGAAATGCTGGATGTCAGTTTTAATAAGTTAGTTGGGGAAATTCCAACAACTATCAGTGCAAAGCATCTGAAATTTGTTTTTCTGACTGGCAACATGTTAAGTGGAAAGATACCAGACTCAACCTTGCAGGCTGGAAGCAACATTGATCTTTCTTACAACAATTTTACACTAAGTCCTGAGCAGTCTGCCTGTCGAGATGACCTGAATTTAAACCTAAATTTGTTTCAGAGCTCCTCAGGGCCCAATGATCTAAGGAGAGCTCTGCCATGCATGAAGAATTTCAGTTGTCCAAGATATTCAACTTGTTTGCATGTTAATAGTGGTGGAAAGGATGTAACTGTGATAGAAAATAAAGAACATTTGCTCTACTTAGGAGATGGAGATGAATTAGGCGGCACAGCAAAATTATATTATGATTCCAACAATAACTGGGGGTTCAGCAGCACTGGAGACTTCATGGATGACAATGACTTCCTGAATACACGTTACAGTGTGTTTCTGGCATCCTCAAGCATGCCCAATATATATGCAACAGCTCGTATCTCCCCGATTTCACTAACATATTTTCACTATTGCTTGGAAAATGGAAACTATACTGTAAATCTACACTTCGCAGAGATACAATTTACAAATGATAGGACATATAATAGCCTTGGGAGGCGTGTATTCGATATCTATGTTCAGGGAAGATTAGTTCGAAAGGATTTCAATATTGAAAATGAAGCGCATACGTCTCAGAAGCCAATCAAAATACCAATATATAATGTTATTGTAGCAGATAATGTCTTGGATATTCGATTCTATTGGGCTGGCAAAGGGACTACAAGAATTCCTACCAGTGGAGTTTATGGTCCCCTTGTATCAGCTTTATCTATTGTTTCTGAGTCTAAACGTTGCTCAGATGTTCCAAAAAGGGGAAGCGCTAATATAATAATTGGAGTGGCAGTTGGGGTTGGGGCTCTCTGCTTAATACTTTTTATCGTGGGACTCTTTTGGTGTAGGAGCCTCTTCAGAGGAAAATCTGAAAGGGAAAAGGGTGCTGAAGGACTAGATTCCCATATTGGAACGTATAGCCTAAAACAGATAAGAGATGCCACTGACAATTTCAGTCCTGATAACAAGTTAGGGGAGGGTGGTTTTGGTCCTGTCTATAAGGGGCAGTTATCTGATGGTACTTGGGTAGCAGTCAAACAACTTTCTTCGAAATCCCGGCAAGGAAACCGTGAATTCTTAAATGAGATAGGCATGATTTCTTGTGTGCAACATCCTAATCTTGTGAAGCTTCACGGATGTTGTATTGAAGGGGATCAACTAATGTTAGTTTATGAGTACTTGGAAAATAATAACCTCGCCCGTGCTTTATTTAGCCGAAGAAATCAACTTAAACTTGATTGGCCTACAAGGCTTAAAATCTGCATTGGCATTGCAAAGGGTCTTGCATTTCTTCATGAAGAATCAACTCTCAAGATTGTTCACCGAGACATCAAGGCCACCAATGTGCTATTGGACGGAGATTTAAATCCTAAGATATCTGACTTTGGGTTGGCTAGGCTCAATGAAGAGGAGAAGACCCATATTAGTACTCGAGTGGCTGGGACTATAGGATATATGGCGCCAGAATATGCATTATGGGGTTACCTAACATACAAGGCAGACGTTTATAGTTTCGGAGTTGTTGTCTTGGAAATTATTAGTGGGAAAAGCAACAATGATTATATGCCAAGTGATAATTATGTTTGTCTTTTGGATTGGGCATGCCATTTGCATAGAACTGAAAGCATGTTACAGCTGGTTGATGAAAGGTTGGGATCTGAGGTGAACCCAAAAGAAGTTGAAGTCATGGTGAAAGTGGCACTTCTGTGCACTAACGCCTCGCCATCACTTAGGCCAACAATGTCTGAAGTCGTGAACATGCTCGAAGGAAGAATGAGCATTCCAGAGGTTAACCCAGAGCAGAGTGCTGGGGAAGATTTGAGGTTTAGAGCCTTAAGAAACATTCAAAGGCATATAGAAAATCAGAGTGTGAGCACAAGCCATACAGAATATTCAAACGATGCCGCTGTAAATAGCTCTCCTCCCTTAACATCTGACCATGATTTACATGGGATACGCTCAGAACCATAA 3006 0.4039 MNFFAFFLIIVLSSFRYAESKLPQEEVDALREIVSTMGSTYWKFDGDSCQIETVGLTPVPSSGSQSSIGCQCFAENGTNCHVVSILLKGYSLPGMLPPQLVKLPYLKEVDFALNYLNGTIPKEWISTKLSSISLLVNRLSGEIPKELGKMTSLTFLNLEANQFSGLVPRELGNLINLQTLFLSSNKFSGHIPETFAQLKNLTDFRINDNNFSGTIPNFIQNWKPLQRLEMHGSGLEGPIPSNISLLSNLLQFDIAGPSQDFPSLSNMTALIRLVLRNCNITGELPTYVWTMQDLEMLDVSFNKLVGEIPTTISAKHLKFVFLTGNMLSGKIPDSTLQAGSNIDLSYNNFTLSPEQSACRDDLNLNLNLFQSSSGPNDLRRALPCMKNFSCPRYSTCLHVNSGGKDVTVIENKEHLLYLGDGDELGGTAKLYYDSNNNWGFSSTGDFMDDNDFLNTRYSVFLASSSMPNIYATARISPISLTYFHYCLENGNYTVNLHFAEIQFTNDRTYNSLGRRVFDIYVQGRLVRKDFNIENEAHTSQKPIKIPIYNVIVADNVLDIRFYWAGKGTTRIPTSGVYGPLVSALSIVSESKRCSDVPKRGSANIIIGVAVGVGALCLILFIVGLFWCRSLFRGKSEREKGAEGLDSHIGTYSLKQIRDATDNFSPDNKLGEGGFGPVYKGQLSDGTWVAVKQLSSKSRQGNREFLNEIGMISCVQHPNLVKLHGCCIEGDQLMLVYEYLENNNLARALFSRRNQLKLDWPTRLKICIGIAKGLAFLHEESTLKIVHRDIKATNVLLDGDLNPKISDFGLARLNEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVVLEIISGKSNNDYMPSDNYVCLLDWACHLHRTESMLQLVDERLGSEVNPKEVEVMVKVALLCTNASPSLRPTMSEVVNMLEGRMSIPEVNPEQSAGEDLRFRALRNIQRHIENQSVSTSHTEYSNDAAVNSSPPLTSDHDLHGIRSEP 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0930 1001 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 192 256 - -
Mibi03g0930 1001 Gene3D Phosphorylase Kinase; domain 1 629 738 - -
Mibi03g0930 1001 Gene3D Transferase(Phosphotransferase) domain 1 739 949 - -
Mibi03g0930 1001 ProSiteProfiles Protein kinase domain profile. 663 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0930 1001 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 10 967 - -
Mibi03g0930 1001 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 257 377 - -
Mibi03g0930 1001 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 28 191 - -
Mibi03g0930 1001 Gene3D Ribonuclease Inhibitor 193 258 IPR032675 -
Mibi03g0930 1001 Gene3D Ribonuclease Inhibitor 259 362 IPR032675 -
Mibi03g0930 1001 MobiDBLite consensus disorder prediction 965 1001 - -
Mibi03g0930 1001 Gene3D Ribonuclease Inhibitor 40 192 IPR032675 -
Mibi03g0930 1001 Pfam Protein tyrosine and serine/threonine kinase 666 933 IPR001245 GO:0004672|GO:0006468
Mibi03g0930 1001 CDD STKc_IRAK 669 935 - -
Mibi03g0930 1001 SUPERFAMILY L domain-like 68 371 - -
Mibi03g0930 1001 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Mibi03g0930 1001 SMART serkin_6 663 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0930 1001 FunFam Putative LRR receptor-like serine/threonine-protein kinase 739 945 - -
Mibi03g0930 1001 Pfam Malectin domain 396 584 IPR021720 -
Mibi03g0930 1001 SUPERFAMILY Protein kinase-like (PK-like) 646 941 IPR011009 -
Mibi03g0930 1001 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 632 738 - -
Mibi03g0930 1001 Gene3D - 393 591 - -
Mibi03g0930 1001 MobiDBLite consensus disorder prediction 965 990 - -
Mibi03g0930 1001 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 394 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0930 Mibi-ChrMibi03 18549894 18560388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0930 1 828 Receptor kinase-like Gene Family AT1G29750 60.573 0.0 1026
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g0930 PK_Tyr_Ser-Thr 9.9e-51 CL0016