Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0879 ATGCCTCGCAAGGGGAATTATGGACTTGATTATGATGATGGTTTCGATGACTATGAAGGGTATGAATATGATGTTGAAATAGAAGAATATGAAGAACCTGAACCTGTTAAGAAGCAAGAGTCTAAAAGGGTTTGGAGATGCCCTATCTGCACTTACGACAACGAAGAGGGCTTGAATGTATGTGATATTTGTGGTGTTGCCCGGCATCCTTTGGCTAACACAGGAGCTTCTGACAATAACAAAACAGCTCCTTTCAAGTTTGATGTTCCATCCCCAGACGATGTGGTTTCTACTGGACTGCAGTCTTCCAAAAAGGGATTGAAAGGTACCATGCATCTGTCTCTGTGTGTGTGTGTGTGGACAGTTGCTGACAGTAGAAGTTCTTACGTTTCATCAAGTATCACACAAAATAACGAACTGAAAGTACAGCCAAATGGTGGAAGTTTAGATGGCTCATCATCTTTGGTTCAGAAGGGCAAGCAGGATGCTTTTGCTGAGAGCAAGCTTTCTAAGGATGTGGTATCTAATAAGGAAATAAGTGATAAATCTTCAGACAGCTTACCAGCATCTTCTGCAAAGGGTGCTGGTAAAATGAGTAAAATAAAGTCTTCCAATAAAGGTAAAGTTGATATTCAATCCGGTGAAGAATTGTCAGATAGTTTGTCTGCACAGCTGAAAGTTAGAGACAGTGGTAGTGAAATTTCTTGCTCTTCTAGCAAAGATGTCAGACCTGGAAAATCAGACAATACTATTTCTAAAGGACCACATACTCAAATGCCTTATAAACCTGAAAAATGGATGCTCCCTCAACAAGCTGAAGATACCTTGACTCAGCTGAATCTTGCAGTTGTTGGTCATGTTGATTCTGGGAAGTCAACACTCTCAGGAAGACTACTACACTTGTTGGGACGAATTACACAAAAAGAAATGCATAAATATGAAAAGGAGGCCAAATTACAGGGTAAGGGATCTTTTGCTTATGCTTGGGCCCTGGATGAAAGTTCAGAAGAAAGGGAAAGGGGAATAACGATGACGGTTGCTGTTGCGTATTTTGACACCAAGAAATATCATGTTGTTGTGCTCGACTCTCCGGGTCATAAAGATTTTGTTCCAAACATGATTTCTGGGGCAACGCAAGCTGATGCTGCAATTCTTGTTATCGATGCATCGGTTGGTGCATATGAAGCAGGCATGGACAGTGGCAAAGGACAAACAAGGGAGCATGCACAGCTCATTAGAAGTTTTGGTGTTGACCAGGTTATTGTTGCAATAAATAAGATGGATGCTGTGGGATACTCTAAAGATCGGTTTGATTTAATTAGACAGCAATTGGGAGTGTTCCTGCGGACTTGTGGTTTTAAAGATTCTTCTACGTCATGGATTCCCTTGAGTGTCATGGAAAATCAAAATTTGGTGGCATCTCCTTCTGATGTTCGTTTCAAATCTTGGTATAAAGGACCCTATTTGTTAGATGCAATTGATTCGCTTCAACCTCCAATTAGAGAATTCTCGAAGCCTCTACTAATGCCAATATGTGATGTTATCAAATCACCTACGCTTGGACAGGTCTCTGCTTGCGGTAAGTTGGAAGCTGGAGCTCTTCGGAATGGATCAAAGGTCTTAGTTATGCCATCAGCTGTTTTGGGGACAGTTCGTAATGTGGAGCGGGATTCTAATGCCTGCACTGTTGCTAGAGCTGGGGATAATGTAGCTGTCACGTTGAATGGTGTTGATGCAAGTCATGTAATGCCAGGAGGAGTGTTATGTCATCCTGATTTTCCTGTTAAAGTTGCAAGTCATTTGGGGTTGAAGGTGCTTGTGTTAGAAGGTGCAAATCCTATATTGGTTGGATCACAGCTAGAATTTCATGTACACCACGCCAAGGAGCCTGCTAGAGTTTCAAAAATACTGTCAGTACTTGACCCAAAGACTGGGAAGGTGACAAAAAAATCCCCTCGCTGTCTCATTGCGAAGCAGAGTGCAATACTTGAGGTAATTTTGCAAGAGCCAGTATGTGTGCTAGAGTCCTCTAGCTGTAAAGCTCTTGGAAGGGTATCTCTAAGAGTATTAGGAAGGACAATTGCTGTTGGACTTGTGACCCAAATAATTGAAGGGCAAGAGTGA 2124 0.4195 MPRKGNYGLDYDDGFDDYEGYEYDVEIEEYEEPEPVKKQESKRVWRCPICTYDNEEGLNVCDICGVARHPLANTGASDNNKTAPFKFDVPSPDDVVSTGLQSSKKGLKGTMHLSLCVCVWTVADSRSSYVSSSITQNNELKVQPNGGSLDGSSSLVQKGKQDAFAESKLSKDVVSNKEISDKSSDSLPASSAKGAGKMSKIKSSNKGKVDIQSGEELSDSLSAQLKVRDSGSEISCSSSKDVRPGKSDNTISKGPHTQMPYKPEKWMLPQQAEDTLTQLNLAVVGHVDSGKSTLSGRLLHLLGRITQKEMHKYEKEAKLQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASVGAYEAGMDSGKGQTREHAQLIRSFGVDQVIVAINKMDAVGYSKDRFDLIRQQLGVFLRTCGFKDSSTSWIPLSVMENQNLVASPSDVRFKSWYKGPYLLDAIDSLQPPIREFSKPLLMPICDVIKSPTLGQVSACGKLEAGALRNGSKVLVMPSAVLGTVRNVERDSNACTVARAGDNVAVTLNGVDASHVMPGGVLCHPDFPVKVASHLGLKVLVLEGANPILVGSQLEFHVHHAKEPARVSKILSVLDPKTGKVTKKSPRCLIAKQSAILEVILQEPVCVLESSSCKALGRVSLRVLGRTIAVGLVTQIIEGQE 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0879 707 PANTHER TRANSLATION FACTOR 275 702 - -
Mibi03g0879 707 Pfam Elongation factor Tu C-terminal domain 596 702 IPR004160 -
Mibi03g0879 707 CDD HBS1_C_III 594 702 - -
Mibi03g0879 707 MobiDBLite consensus disorder prediction 205 256 - -
Mibi03g0879 707 ProSitePatterns Zinc finger RanBP2-type signature. 45 64 IPR001876 -
Mibi03g0879 707 SUPERFAMILY Ran binding protein zinc finger-like 41 68 IPR036443 -
Mibi03g0879 707 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 278 521 IPR027417 -
Mibi03g0879 707 Gene3D Translation factors 597 706 - -
Mibi03g0879 707 Gene3D - 267 500 IPR027417 -
Mibi03g0879 707 MobiDBLite consensus disorder prediction 168 263 - -
Mibi03g0879 707 SUPERFAMILY Translation proteins 498 593 IPR009000 -
Mibi03g0879 707 FunFam Elongation factor 1 alpha-like protein 269 500 - -
Mibi03g0879 707 PRINTS GTP-binding elongation factor signature 359 369 IPR000795 GO:0003924|GO:0005525
Mibi03g0879 707 PRINTS GTP-binding elongation factor signature 339 347 IPR000795 GO:0003924|GO:0005525
Mibi03g0879 707 PRINTS GTP-binding elongation factor signature 375 386 IPR000795 GO:0003924|GO:0005525
Mibi03g0879 707 PRINTS GTP-binding elongation factor signature 280 293 IPR000795 GO:0003924|GO:0005525
Mibi03g0879 707 PRINTS GTP-binding elongation factor signature 420 429 IPR000795 GO:0003924|GO:0005525
Mibi03g0879 707 Pfam Elongation factor Tu GTP binding domain 279 495 IPR000795 GO:0003924|GO:0005525
Mibi03g0879 707 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 276 507 IPR000795 GO:0003924|GO:0005525
Mibi03g0879 707 FunFam Translation elongation factor EF-1 503 593 - -
Mibi03g0879 707 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 604 703 IPR009001 -
Mibi03g0879 707 FunFam elongation factor 1-alpha isoform X4 597 706 - -
Mibi03g0879 707 CDD EF1_alpha 280 499 - -
Mibi03g0879 707 Gene3D Translation factors 504 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0879 Mibi-ChrMibi03 15884489 15891891 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0879 40 704 Eukaryotic Initiation Factors Gene Family AT5G10630 61.078 0.0 803