Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0875 ATGGGTTCCCACGTTGGTTTGTGTGCTGATGATTTTGAGAAAGGTGAAGCTGATGTTATGGAGAAAGATCCTACTGGACAAGTTAAGATTGGAGATCTTGGATTGGCAACTGTCCTACTGCAACCCACTGCAAGCAGTGTTGTTGGGACACCAGAATTCATGGCACCTGAACTTTATGAAGAAGAGTATAATGAACTTGCAGACATATATTCTTTTGGTATGTGCATGTTAGAAATGATCACTTGTGAGTACCCATACAACGAATGCCAAAATCCTGCGCAGATATATAAGAAAGTTACTTCTGGAATAATGCCTACAGCTCTTAGTAAAGTGACTGATCCACAAGTGAAGCGGTTCATAGAGAAATGTTTAGTTCCAGCATCTATGAGATTGTCCGCATCTGAGCTATTGAATGATCCGTTTTTTACTACTGACAATATGATGAAGATTGACAATGCACCACAATTGGCCAATCACATGCCAGAATTTGTGACACTACCAACAACTGAGCCCATGCTAATGGAGATTGACCAAAATGTCAGGCATGTTATGCCTGGCCCTTGTTTGGAAGTTAGCGAAGAAATTCTTCAAACATCAACTGTAGATTTCGTTAGGAGGAATAAGAGGACTGAATTCAGGTTACGAGGGGAGAAAAATGCTTCTAACAGAAAAATTTCACTTGATTTACTTATTGCTGAGGCCAATGGTCCTACGAGGAATGTCCAATTTCCATTCTATCTTGATTTGGATACAGCAACTTCAGTTGCTAAGGAGATGGTAGCAAGTTTGAATCTCAATTCTAAACACATGAGTGTCATTGCCGAACTAATACATACCATGATTATCAGGCTTGTCCCTAACTGGAAAGTGTCACGTCAACAATTATCATCTGTAGCAAATTGTTTGGATGGCCATTCACATGTAGTTTCAAGTGGGGGATCGTCTTTAAGGTGCCATAGTGATGAGGATCTTGTTAACTCACTAGTTCTGAATGATCAAGAGAAACATGAATCAATTATGTCAGGGATTTCAACAGAAGATGATATTACTAAGTCCTTACAATATGATTATACCCTTTTTGATGGATCCTTTGAAGGATCCGTTGCTAAAAGGTCAAATTTAGATGTTAGGTTATATGATCAAGATAAACACACCTGGGAAGTTAATGGAGGTGGCTCTTTTAAAATCAATGGTTTTGATTACTCAGTGAACTCAACTATCTCATTTGTTGATTCATTTGGCGGGGATAAGGCCAAGAATTCTTACGTGCCAAGCATCAATTCTCTTTCTCTTGAAAACAATGATCAATTTGAGGAGGTGCTGCCAGAGATCGAAGCAATAAATACACAGTACCAGCAATTCTTTCTTACACAGTACCAGCAATTCTTTCTTATAGTTGTGAAGATGAGCGAGGATACATTAGGAAACACAAAAAGTAGATGGATTACAAGGAAGAAAATACCTGTGATTTTATGGATTGGGAAACCTTTTTAA 1494 0.3855 MGSHVGLCADDFEKGEADVMEKDPTGQVKIGDLGLATVLLQPTASSVVGTPEFMAPELYEEEYNELADIYSFGMCMLEMITCEYPYNECQNPAQIYKKVTSGIMPTALSKVTDPQVKRFIEKCLVPASMRLSASELLNDPFFTTDNMMKIDNAPQLANHMPEFVTLPTTEPMLMEIDQNVRHVMPGPCLEVSEEILQTSTVDFVRRNKRTEFRLRGEKNASNRKISLDLLIAEANGPTRNVQFPFYLDLDTATSVAKEMVASLNLNSKHMSVIAELIHTMIIRLVPNWKVSRQQLSSVANCLDGHSHVVSSGGSSLRCHSDEDLVNSLVLNDQEKHESIMSGISTEDDITKSLQYDYTLFDGSFEGSVAKRSNLDVRLYDQDKHTWEVNGGGSFKINGFDYSVNSTISFVDSFGGDKAKNSYVPSINSLSLENNDQFEEVLPEIEAINTQYQQFFLTQYQQFFLIVVKMSEDTLGNTKSRWITRKKIPVILWIGKPF 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0875 497 Pfam Protein kinase domain 24 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0875 497 Gene3D Transferase(Phosphotransferase) domain 1 17 150 - -
Mibi03g0875 497 SMART serkin_6 3 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0875 497 ProSiteProfiles Protein kinase domain profile. 1 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0875 497 SUPERFAMILY Protein kinase-like (PK-like) 23 192 IPR011009 -
Mibi03g0875 497 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 24 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0875 Mibi-ChrMibi03 15695291 15697991 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0875 25 489 MAP Kinase Kinase Kinase AT5G41990 38.495 9.50e-83 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mibi03g0875 Pkinase 2.3e-17 CL0016