Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0816 ATGAAGGAAGTGTTAAGAGGGGCAAAGGAATTGATTTATGGATTCAATGCCTTATTGCCGGAAAGATACCAGATAACGCCCAATGAGGATGGAGATCCTCCAACGAGGGTGATTGACTATGAAGAAGGGCTGAATTATTTAGGCAAGATAAGGGCCAGTTTTGCTCTCCTTAGGGATCGATTTCAAAATGATCAGCATGCGTACCTTTCATTTGTGGACACTTTGAACATGTTCCACATTGGGAGCAAGTGTGTAACTGAGGTCAGAGTAAAGGTGAAGGAACTATACGAAGGGCATGGTGATTTGATTTCCGAATTCAATTCCTTCTTGCCCAAAGTCTATGGGATAACACTTGATGAGGATGATGGAAATGAGAGAGAAACTGATATTTTTATCAACAGGGTAATACCAGTTCATGAACTTGACCTCCATGATTGTGAACTTTGTAATGATAGCTACCAGGGTCTTCCTGAAGATGTAGAGAACTACTAG 492 0.4126 MKEVLRGAKELIYGFNALLPERYQITPNEDGDPPTRVIDYEEGLNYLGKIRASFALLRDRFQNDQHAYLSFVDTLNMFHIGSKCVTEVRVKVKELYEGHGDLISEFNSFLPKVYGITLDEDDGNERETDIFINRVIPVHELDLHDCELCNDSYQGLPEDVENY 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0816 163 Pfam Paired amphipathic helix repeat 68 110 IPR003822 GO:0006355
Mibi03g0816 163 SUPERFAMILY PAH2 domain 38 111 IPR036600 GO:0006355
Mibi03g0816 163 PANTHER SIN3B-RELATED 2 159 IPR039774 GO:0003714
Mibi03g0816 163 ProSiteProfiles PAH domain profile. 36 113 IPR003822 GO:0006355
Mibi03g0816 163 Gene3D Paired amphipathic helix 43 111 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0816 Mibi-ChrMibi03 13523349 13523910 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi03g0816 PAH 2.8e-07 No_clan