Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0752 ATGAGTTTCTTGATGGGTTCACCTCGCCGTCAGAAAAAGATCGAGGCGGCGAATAATCGCTCCGGCGACTTCGATGATGACGAGGATTCACTCGATCCGTTTGATATTAAAAGGACAAAAAATGCTCCTATTGAACGCCTTAGACGGTGGAGGCAAGCTGCGCTTGTGCTTAATGCTTCTCGTAGATTTCGTTATACCTTGGACCTGAAAAAAGAAGTAGAGAAGGAGCAAACATTGAGGAAGATCGGAGCGCATGTTGCAGCCATTAGGGCCGCATGTCTTTTCAAGAATGCTGCTGTGCTGCCTATGAATGAAGAGATTGAGGAGATACCAGCTATGTTTGTCAATTCCTTCAAAAGGAAACAGGTCAACGAGAGCTTACTTCATCGACTGCGCGAAACGTTGTGTTCTGCTGTGGCTGTGGTTAAGGATCAAGAGCTTAGGCAGCCCACGGAGGATCGGCATCTTCCCCTCTATAATTTTATGTTTAAAATACGTGAACTGTTGGATACAATTGGTGATGGACATGTTACTAACCTTCAGCAGTGCAGGGAACTGCAAGAAATTATCAGTGAAATCAAAGAGCATCTTGCAACATTTGATGATCCACAGAATCATGATGCTGCCGATCCAATCTCTTCTGCCATGAACTTTAACCTATGGGAAAAGAAATCTCGTATTGGATCAGGGGGATATGGAATTGTTCACGTTGGTATCAATAGGAAGACTGGAACATCATGCGCAATAAAGGAAATGCTTTGTATTGACGATCGATACGCACAAGCTCTACATAAGGAAATTAAAATTCTCAGCCAATTGGAACATCAAAACATTGTAAAGTATTATGGCAGTAAAATAGTGGAAAGCCAGGTCTCCATATACATGGAATATGTTCAACCTGGTTCACTGAAGAAATATATCGCATCTCGAGGTGCTTTGCAAGAATCAGTAGTTCGAAATTTCACCGCACAAATTCTTTCTGGATTGGCTTATTTACACAGTCAAAGAGTAGTTCACAGGGACATCAAACCAGATAATTTACTTGTGGATTCTCAGACCAATGTAAAGGTTGCTGACTTTGGTTTGGCTAAGAATCTATCTCAATCGGTGGGCAAGCACTCAGTTGATGGAACATTCTATTATGCAGCTCCAGAGGTTATTCAGAAAAAAGCATATAAGAGCTCTGGTGAAGCCTATGCTGCTGATATTTGGAGTTTGGGCTGTGTAGTCATTGAAATGTTCACGGGCAAGCATCCTTGGCCTGATTGCAATGAGCCGATACAGGCCGCTTATAAAGTTTGTTGTAATAAGCAAGATCCGGCAATACCAGCAACTCTATCAAATGCAGATGAAAGCGTTTTTGGATTCCATTCAGCTTCACTTGCTTCGGCAGCTATACCCACCAATACATTCCGTTACGGTGAAACCGGAGCCGGGCCTAGCCTGAAGGCATTACAGAGGAGTGCGTCAGCGGTCGTGGGGGAAGTACGGCGCAGAACTCCATAG 1506 0.4363 MSFLMGSPRRQKKIEAANNRSGDFDDDEDSLDPFDIKRTKNAPIERLRRWRQAALVLNASRRFRYTLDLKKEVEKEQTLRKIGAHVAAIRAACLFKNAAVLPMNEEIEEIPAMFVNSFKRKQVNESLLHRLRETLCSAVAVVKDQELRQPTEDRHLPLYNFMFKIRELLDTIGDGHVTNLQQCRELQEIISEIKEHLATFDDPQNHDAADPISSAMNFNLWEKKSRIGSGGYGIVHVGINRKTGTSCAIKEMLCIDDRYAQALHKEIKILSQLEHQNIVKYYGSKIVESQVSIYMEYVQPGSLKKYIASRGALQESVVRNFTAQILSGLAYLHSQRVVHRDIKPDNLLVDSQTNVKVADFGLAKNLSQSVGKHSVDGTFYYAAPEVIQKKAYKSSGEAYAADIWSLGCVVIEMFTGKHPWPDCNEPIQAAYKVCCNKQDPAIPATLSNADESVFGFHSASLASAAIPTNTFRYGETGAGPSLKALQRSASAVVGEVRRRTP 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0752 501 SMART serkin_6 221 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0752 501 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 192 448 - -
Mibi03g0752 501 ProSiteProfiles Protein kinase domain profile. 221 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0752 501 ProSitePatterns Protein kinases ATP-binding region signature. 227 250 IPR017441 GO:0005524
Mibi03g0752 501 Pfam Protein kinase domain 222 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0752 501 Gene3D - 43 97 - -
Mibi03g0752 501 Gene3D Transferase(Phosphotransferase) domain 1 301 489 - -
Mibi03g0752 501 FunFam Calcium-transporting ATPase 42 98 - -
Mibi03g0752 501 CDD STKc_MAPKKK 221 447 - -
Mibi03g0752 501 MobiDBLite consensus disorder prediction 1 29 - -
Mibi03g0752 501 Gene3D Phosphorylase Kinase; domain 1 201 298 - -
Mibi03g0752 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 337 349 IPR008271 GO:0004672|GO:0006468
Mibi03g0752 501 Pfam Ca2+-ATPase N terminal autoinhibitory domain 32 73 IPR024750 GO:0005516
Mibi03g0752 501 SUPERFAMILY Protein kinase-like (PK-like) 221 448 IPR011009 -
Mibi03g0752 501 FunFam Maternal embryonic leucine zipper kinase 216 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0752 Mibi-ChrMibi03 10962097 10970822 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0752 221 447 MAP Kinase Kinase Kinase AT5G66850 49.787 2.29e-65 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mibi03g0752 Pkinase 2.1e-61 CL0016