Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0687 ATGGATGATGAAGGCAAGAACAAGGGTATCATCACCGATTCCCCTAATCAACCTTACTATGGAACCTTCCAAGGCGTCGCCAACTATTATCCGCCGCCTCCTCCGCCGCAACCTCAGCCGCATACGGTTGTCGGATTACCTCAACCAATTCCGCCTCCGCCGCCGGCAGCTTACGGTGGTCATTATTTCCAAGGATATCAAACCGTTCCAGGTTATGTTGTTGCTGAAGGAAGGCCCATGAGAGAACCTCGTCTTCCTTGTTGTGGACTTGGTCTGGGTTGGTTCTTGTTTATAGCGGGATTCTTTCTTGGTGGTATGCCCTGGTATGCTGGAACTATTGTGCTACTATGTGTACAGATGGATTACCGAGAAAAGCCTGGATTAGTTGCCTGCTTAGTTGCTTCGATCATTGCTGTCATAGCTGTGACTTTTGGTCTTACAAATAAAGCTCATGATTGAGGCATCAGGGTCCTTCCTTTTTTCATCTTCTCTCGCAAAATGGTTGCTTTCAGGTTTCACCAGTACCAGGTCGTTGGGAGAGCTTTGCCCACGGAATCAGATGAACATCCCAAAATTTACCGCATGAAACTCTGGGCTACCAACGAGGTTCGCGCCAAGTCGAAGTTCTGGTATTTTTTGAGGAAACTGAAGAAGGTTAAGAAAAGCAATGGTCAAGTGCTTGCCATCAATGAGATTTTTGAGAAGAACCCAACCAAGATCAACAACTATGGCATTTGGTTGCGTTATCAGAGTAGAACCGGGTATCACAACATGTACAAGGAGTACCGTGATACCACTCTAAATGGTGCAGTTGAGGCAATGTACACCGAGATGGCTTCCCGTCACAGGGTCCGGTTCCCTTGCATTCAAATCATCAAGACGGCCACCATCCCAGCTAAGCTTTGCAAAAGGGAGAGCAGCAAGCAATTCCACAACTCAAAAATCAAGTTCCCATTGGTTTACAGGAAAGTCAGGCCACCCACCAGGAAGCTTAAAACCACATACAAGGCCAAAAAGCCCAACTTGTTTATGTAA 1035 0.4686 MDDEGKNKGIITDSPNQPYYGTFQGVANYYPPPPPPQPQPHTVVGLPQPIPPPPPAAYGGHYFQGYQTVPGYVVAEGRPMREPRLPCCGLGLGWFLFIAGFFLGGMPWYAGTIVLLCVQMDYREKPGLVACLVASIIAVIAVTFGLTNKAHDXGIRVLPFFIFSRKMVAFRFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKINNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEAMYTEMASRHRVRFPCIQIIKTATIPAKLCKRESSKQFHNSKIKFPLVYRKVRPPTRKLKTTYKAKKPNLFM 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0687 344 Hamap 50S ribosomal protein L18Ae [rpl18a]. 172 235 IPR028877 -
Mibi03g0687 344 Gene3D - 237 309 - -
Mibi03g0687 344 Gene3D - 164 236 - -
Mibi03g0687 344 PANTHER 60S RIBOSOMAL PROTEIN L18A 168 343 IPR028877 -
Mibi03g0687 344 MobiDBLite consensus disorder prediction 28 58 - -
Mibi03g0687 344 FunFam 60S ribosomal protein L18a 167 237 - -
Mibi03g0687 344 SUPERFAMILY RplX-like 237 312 - -
Mibi03g0687 344 FunFam 60S ribosomal protein L18a 238 313 - -
Mibi03g0687 344 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 173 294 IPR023573 GO:0003735|GO:0005840|GO:0006412
Mibi03g0687 344 MobiDBLite consensus disorder prediction 1 58 - -
Mibi03g0687 344 SUPERFAMILY Formin homology 2 domain (FH2 domain) 31 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0687 Mibi-ChrMibi03 9356076 9363868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0687 165 344 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 91.667 2.05e-121 347