Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0684 ATGCGAGGGTTTTCGTTTTCGAGTCGTCAGAGCATAAACACAGAAGCCGCAAGCTCAATCCCTCTTAACTTAATCATGTCAAGGAGAAAGGTTAGAGAGCCAAAGGAAGAAACTGTTACTCTTGGGCCAGCCGTCAGAGATGGAGAGCATGTTTTTGGCGTCGCCCATATCTATGCATCCTTCAACGATACATTCATTCATGTGACTGATTTGTCCGGAAGGGAAACCCTTGTTCGTATTACAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCCCCTTATGCTGCTATGCTTGCAGCACAGGATGTGTCAGCTAGATGCAAGGAGCTGGGCATTACTGCCCTTCACATCAAGCTCCGTGCTACTGGTGGTAACAAGACAAAAACACCAGGCCCTGGTGCTCAGTCTGCTCTCCGTGCTCTTGCTCGTTCAGGAATGAAAATTGGCCGAATAGAGGATGTGACTCCAATCCCATCAGACAGCACCAGGAGAAAGGGTGGTAGAAGAGGAAGAAGGCTTTAA 528 0.483 MRGFSFSSRQSINTEAASSIPLNLIMSRRKVREPKEETVTLGPAVRDGEHVFGVAHIYASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0684 175 FunFam 40S ribosomal protein S14 26 175 - -
Mibi03g0684 175 Gene3D Ribosomal protein S11 26 175 IPR036967 GO:0003735|GO:0005840|GO:0006412
Mibi03g0684 175 Pfam Ribosomal protein S11 53 171 IPR001971 GO:0003735|GO:0005840|GO:0006412
Mibi03g0684 175 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 24 172 IPR001971 GO:0003735|GO:0005840|GO:0006412
Mibi03g0684 175 MobiDBLite consensus disorder prediction 155 175 - -
Mibi03g0684 175 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 28 170 IPR001971 GO:0003735|GO:0005840|GO:0006412
Mibi03g0684 175 ProSitePatterns Ribosomal protein S11 signature. 140 162 IPR018102 -
Mibi03g0684 175 SUPERFAMILY Translational machinery components 48 173 - -
Mibi03g0684 175 Hamap 30S ribosomal protein S11 [rpsK]. 28 172 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0684 Mibi-ChrMibi03 9301437 9305853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0684 26 164 Cytoplasmic Ribosomal Protein Gene Family AT3G11510 89.928 2.11e-92 264