Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0677 ATGCAAACTCAGACTATGTCACTTTCCTGTGCAAAGAACTTCTTTCAGAGGTTCTGTTTGGATGAAATCAATATGGAAAGTTTTTCTCATAGCAACTTTCTGTCTAATGATCTTCTTCCATCTCTTGGAGCCCAAATGGTGCAGGAAATCAAACTAAGAAGATTCATAATCTCCCCTTTTGATCCAATATATAGGGCTTGGGAGATGATACTGGTGGTTTTAGTTATTTACTCTGCCTGGATATGCCCCTTTGAGTTTGCCTTTCTGTCTATGAAGCAAGATGCATTGTTCATCATCGACAACATTGTTGATGGCTTCTTTGCCATCGACATCGTGCTCACGTTCTTTGTTGCATATTTAGATAGTCAGTCTCACCTCCTTGTTGATGATCCCTGGAAAATTGGAATCAGGTACATATCTACCTGGTTTATTTTTGATGTCTGCTCAACAGCACCATTTCAAAGCATCAGCCTCCTCTTCACTAACCATAGCAGTGAACTTGGCTTTGACCTGCTTAACATGCTTCGGTTGTGGCGTCTGAGACGAGTCAGCACTCTGTTTGCGAGACTTGAGAAAGACATCCGCTTTAACTATTTCTGGACAAGGTGCATAAAACTCATTGCTGTAACATTGTTTGCTGTTCATTGTGCTGGATGTTCTTGCTATCTAATTGCAGAAAAGTACCCTGATTCCAAAAGGACCTGGATTGGTGCAACACACCCAAATTTCAAAAAAGAAGATCTTTGGGACAGATACGTGACTGCAATATACTGGTCCATTGTAACACTTACCACTACTGGCTATGGGGATTTACATGCTCAAAACCCTGGGGAGATGCTGTTTGATACTGTGTTCATGCTGTTCAATTTGGGATTAACATCATACATCATTGGAAACATGACAAACCTAGTGGTTCACTGGACCAGCCACACCAAAACTTTTAGAGATACGATTAGAGCAGCATCAGAGTTTGCATCAAGGAATCATCTGCCGCATCACCTACAAGATCAAATGTTGTCACACTTATGTCTGAGGTTTAAAACAGAAGGATTGAAGCAACAAGAAACATTAAATGGTCTTCCTAAGGCTATTCGTTCAAGCATTGCAAAACATCTCTTCCTTCCTATAGTGAAGCAGGTCCGCTTATTCCATGGAGTTTCCCATGACTTCCTTTTCCAACTGGCCTCAGAAATGGAAGCTGAGTATTTTCCTCCCAAGGAAGATGTGATCCTGCAAAATGAAGTTCCTACAGACCTTTACGTGCTAGTTTCAGGGGCAGTGGATCTTGTTCGGCACATGGATGGGTATGATCAAGTTGTGGGGAAAGCAGCTTCAGGAGAAACATTTGGAGAGACTGGGATATTAACCCACGGACCACAGCCGTTCACTATTCGGACTTCAGAGCTTTCTCAAATTTTACGACTCAACAAAACTTCGTTAATGAAGGCTGTTCAGGCGCATCCAGAAGATTCAAAAATCATAATGGATAACCTTGTCAAGAGATTGAAGGGACAAGAAGGCTTGGGCCATGAGTACCCAAATGCAGAACCTGGACAGGTCCTTCATGAAAAAATAGATGGAGTAAAAGCAAGAGAAAGCTTTTCTCATGCATGCACAAACAGTTTGTACCAGGATTCATTAGTCCAAGAAGAAAGGCATAGAAACTCCATAGACTCAGAGATTACATTGACTAAGGTGACAAATGAATATGACGGAAGGGATATTCATGCTGCAACAGTCAAAGGACAACCAGGGATGGTTGACATACTGCTTGAAAGAGATGCAAATGCAAAGCACCCAAATTTCGTAGGTTGGAAATCAAAAACTCAGGTAGAAAAGCAAGATCAAAAGAGCACTTCTAACCTCTTCATAAATTGTGGAGATAGGGAGAGATCAGCTGAACATAGAATAGACTTTGAGGAGCCAGATATGTTAAACCATATCATGAATGACACAACCAGAAACAGCAAACGTGGTGATCCCAGATCATTTAACTACCCTTTAGAGAACGTATATAACAATTCTTATTCGAGTGATCCTAACCGTCGAAGCAATAGAGAAGTGTCTAGATTCAAAAAGAAGAGAGTCACAATTCACTTGATAGGCCAAAGCAGCGGTACTTCACGCGGACAGCACGGGAAGTTGATTATTCTACCTGATTCAATAGAAGAGCTACTCAAGATTGCTGAAGAAAAGTTTGCGGGATCAAAACCTACAAGAGTTATTAATAAAGAGAAAGCAGAGATAGATGACATAGGCGTCATTCGAGATGGTGATCACCTCTTATTCCATTGCAGCAATAGTGAAAATTTGCAGTCATTATAG 2325 0.4108 MQTQTMSLSCAKNFFQRFCLDEINMESFSHSNFLSNDLLPSLGAQMVQEIKLRRFIISPFDPIYRAWEMILVVLVIYSAWICPFEFAFLSMKQDALFIIDNIVDGFFAIDIVLTFFVAYLDSQSHLLVDDPWKIGIRYISTWFIFDVCSTAPFQSISLLFTNHSSELGFDLLNMLRLWRLRRVSTLFARLEKDIRFNYFWTRCIKLIAVTLFAVHCAGCSCYLIAEKYPDSKRTWIGATHPNFKKEDLWDRYVTAIYWSIVTLTTTGYGDLHAQNPGEMLFDTVFMLFNLGLTSYIIGNMTNLVVHWTSHTKTFRDTIRAASEFASRNHLPHHLQDQMLSHLCLRFKTEGLKQQETLNGLPKAIRSSIAKHLFLPIVKQVRLFHGVSHDFLFQLASEMEAEYFPPKEDVILQNEVPTDLYVLVSGAVDLVRHMDGYDQVVGKAASGETFGETGILTHGPQPFTIRTSELSQILRLNKTSLMKAVQAHPEDSKIIMDNLVKRLKGQEGLGHEYPNAEPGQVLHEKIDGVKARESFSHACTNSLYQDSLVQEERHRNSIDSEITLTKVTNEYDGRDIHAATVKGQPGMVDILLERDANAKHPNFVGWKSKTQVEKQDQKSTSNLFINCGDRERSAEHRIDFEEPDMLNHIMNDTTRNSKRGDPRSFNYPLENVYNNSYSSDPNRRSNREVSRFKKKRVTIHLIGQSSGTSRGQHGKLIILPDSIEELLKIAEEKFAGSKPTRVINKEKAEIDDIGVIRDGDHLLFHCSNSENLQSL 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0677 774 Pfam Ion transport protein 65 311 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi03g0677 774 Gene3D Helix hairpin bin 306 372 - -
Mibi03g0677 774 Gene3D Jelly Rolls 375 507 IPR014710 -
Mibi03g0677 774 SUPERFAMILY Voltage-gated potassium channels 59 304 - -
Mibi03g0677 774 MobiDBLite consensus disorder prediction 667 682 - -
Mibi03g0677 774 CDD CAP_ED 382 495 IPR000595 -
Mibi03g0677 774 FunFam Potassium channel KAT2 370 506 - -
Mibi03g0677 774 FunFam Potassium channel KAT3 66 306 - -
Mibi03g0677 774 Gene3D - 65 305 - -
Mibi03g0677 774 PRINTS EAG/ELK/ERG potassium channel family signature 278 289 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi03g0677 774 PRINTS EAG/ELK/ERG potassium channel family signature 296 305 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi03g0677 774 PRINTS EAG/ELK/ERG potassium channel family signature 100 110 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi03g0677 774 PRINTS EAG/ELK/ERG potassium channel family signature 252 269 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi03g0677 774 PRINTS EAG/ELK/ERG potassium channel family signature 77 84 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi03g0677 774 PRINTS EAG/ELK/ERG potassium channel family signature 111 120 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi03g0677 774 SMART cnmp_10 382 499 IPR000595 -
Mibi03g0677 774 Pfam KHA, dimerisation domain of potassium ion channel 694 763 IPR021789 -
Mibi03g0677 774 MobiDBLite consensus disorder prediction 650 688 - -
Mibi03g0677 774 ProSiteProfiles KHA domain profile. 695 774 IPR021789 -
Mibi03g0677 774 ProSiteProfiles cAMP/cGMP binding motif profile. 382 501 IPR000595 -
Mibi03g0677 774 PANTHER POTASSIUM CHANNEL AKT1 29 510 IPR045319 GO:0005249|GO:0006813
Mibi03g0677 774 SUPERFAMILY cAMP-binding domain-like 309 502 IPR018490 -
Mibi03g0677 774 Pfam Cyclic nucleotide-binding domain 402 487 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0677 Mibi-ChrMibi03 9195506 9199827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0677 571 763 Ion Channels AT5G46240 30.500 1.14e-17 85.5