Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0665 ATGAAATTAGCTCTGGAATTTGACCTTCGACAGTATTTTGCTTCTAAGTCTAATGAGAATAAATTGTTGGAGAATGGTGAGAACAATGGGAATTCTTCGGGGGTAATGTCTAATGGCAACACTCATACCAAAAGGACACCGGAAACGACTATCTTTGAACAGTTCCAAAGCCAGGGGCAGAATTCAACTCATTCGAATGGATTTTCATCAAATCATTTGGATGAAAGGCCGCAAAAGCCTTTACTTCCACCTTTTGAATCAGCTGATATGCGTGCTTTAGCAGAGAGTTTATGCAGGGATATTATTCGTGGGAGCCCGGATGTTAAGTGGGAAAGCATCAAGGGGTTAGAAAATGCCAAACGTTTACTGAAAGAGGCTGTTGTGATGCCAATGAAGTATCCCAAGTACTTCACTGGTTTATTATCACCTTGGAAAGGGATTCTTTTGTTTGGCCCTCCTGGGACTGGAAAGACAATGCTTGCAAAGGCAGTTGCGACAGAGTGCAAGACTACATTTTTTAATATTTCAGCATCATCTGTTGTCAGCAAATGGCGAGGTGATTCGGAGAAGTTGGTGAGGGTGTTATTTGAGTTAGCTCGGCACCATGCACCCTCAACAATATTTATTGATGAAATTGATGCAATCATTAGCCAACGTGGTGAAGCAAATAGTGAGCATGAAGCAAGTAGACGGCTTAAGACTGAGTTACTCATACAGATGGACGGTTTGACAAAAACCAATGAACTTGTTTTTGTTTTGGCGGCAACAAATCTTCCATGGACACTGGATGCAGCCATGCTCCGACGTCTTGAGAAGCGAATCCTGGTACCACTTCCAGAACCAGAAGCAAGAAGAGCAATGGTTGAGGAACTCCTTCCACAACTTGATAGTGGTGATCAGATCCCTTACGATTTCTTGGTGGAGAAAACAGACGGATTTTCAGGCTCAGATATTCGGTTACTATGTAAAGAGGCTGCAATGCAGCCTTTGAGACGCCTCTTGTCACAACTTGAACAGAGACAGGAGGTGGTGCCTGAAGAAGAGTTGCCAATAGTGGGGTCAATAAGAGCTGAAGATATAATGGTGGCTTTGAAGAATACACGACCATCTGCTCATGAACTGGCTCCCAAGTATGAGCATTTCAATAATGAATTCGGCAGTCAAATTCTACATTGA 1176 0.4294 MKLALEFDLRQYFASKSNENKLLENGENNGNSSGVMSNGNTHTKRTPETTIFEQFQSQGQNSTHSNGFSSNHLDERPQKPLLPPFESADMRALAESLCRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPMKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVRVLFELARHHAPSTIFIDEIDAIISQRGEANSEHEASRRLKTELLIQMDGLTKTNELVFVLAATNLPWTLDAAMLRRLEKRILVPLPEPEARRAMVEELLPQLDSGDQIPYDFLVEKTDGFSGSDIRLLCKEAAMQPLRRLLSQLEQRQEVVPEEELPIVGSIRAEDIMVALKNTRPSAHELAPKYEHFNNEFGSQILH 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0665 391 FunFam Katanin p60 ATPase-containing subunit A-like 2 279 367 - -
Mibi03g0665 391 MobiDBLite consensus disorder prediction 21 84 - -
Mibi03g0665 391 Gene3D - 106 381 IPR027417 -
Mibi03g0665 391 CDD AAA 114 278 - -
Mibi03g0665 391 Pfam AAA+ lid domain 306 340 IPR041569 -
Mibi03g0665 391 PANTHER AAA DOMAIN-CONTAINING 29 387 - -
Mibi03g0665 391 Pfam ATPase family associated with various cellular activities (AAA) 147 277 IPR003959 GO:0005524|GO:0016887
Mibi03g0665 391 SMART AAA_5 143 280 IPR003593 -
Mibi03g0665 391 Gene3D - 279 367 - -
Mibi03g0665 391 MobiDBLite consensus disorder prediction 21 73 - -
Mibi03g0665 391 FunFam Katanin p60 ATPase-containing subunit A-like 2 106 291 - -
Mibi03g0665 391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 368 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0665 Mibi-ChrMibi03 9000800 9012859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0665 141 351 Calmodulin-binding Proteins AT3G56690 37.850 1.66e-33 130