Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0633 ATGGACTCGAGAACTAGTGCTAGAGCTCCCCAGAAGCAGCACCATAAGACAGGTGGGATTCAAACAATAGAGGCAAAAGACATTAAATCTTCAAAGACAGGAAAATCTGAGTATGTTCAGGACACATCAAAGCACTACATTGGAGACACTTCTGAAAACAAGAAGCTAGGAATTTCAAACTCAAAGGAGTCAGCTGATTCCTTGATTAGTAAATTTGGTTCTGCTGTTTCCTTATCTGTTAATGAACAACTAGCTGGAGGTGTTGATCATGTTGTTAATGGAAATAGAGGTTTGCAGGAAAGCTCTATTGACCAAGAAAAGAAAATATCAGAATATGGAAGTGTGAAAAGTAGTTCTGTTTCTGCTAAAGTTAGTGATGGGGCCAGCAGTCTGGGAAAGACCAGTGGAAGTGCCAAGATTAGCGATCGAGCTGATCTTGTTGAGAGTGGCAAGAGCAGTATTTGTAGAGGAAGTACAAGCAGTGATGTGAGTGACGAGAGCACTTGCAGCAGCTTCAGTAGCAGTGTCAACAAGCCTCACAAGGCAAATGACTTACGATGGGAAGCTATTCAAGCCGTCCGATCTAAAGATGGGGTTTTGGGCTTAGCTCACTTTAGACTGCTGAAGAGGTTGGGTTGTGGGGATATTGGGAGTGTATATCTGTCAGAGTTGAGTGGGACTAAATGTTATTTCGCAATGAAGGTAATGGATAAAGGTTCTTTAGCAAGCCGTAAAAAGTTGCTTCGTGCTCAGACAGAAAGAGAAATACTGCAATCACTTGACCATCCATTTCTCCCAACACTGTATACCCATTTTGAGACAGAGAAATTCTCATGTTTGGTAATGGAATTCTGCCCAGGTGGAGACCTGCACACTCTCAGGCAGAAGCAGCCAGGGAAGCATTTTCCTGAGCAAGCAGTAAAATTTTATGTGGCAGAGGTGCTGCTGGCGTTGGAGTATCTCCACATGCTTGGCATTGTCTACCGTGATCTCAAGCCAGAAAATGTCCTTGTTAGGGATGATGGACATATTATGCTTTCAGACTTTGACCTTTCCCTCCGATGTACTGTTAGTCCAACTCTTGTTAAAAGTTCGGTCATGGAATCTGATCCTTTAAGAAAGAATGCTGTATATTGTGTGCAGCCTGCTTGTATTGAGCCACCTTCCTGCATCCAGCCATCCTGCGTTGCTCCTACGACATGCTTTTCGCCCCGGCTCTTTTCTAGCAAATCGAAGAAGGATCGGAAACCCAAAACTGAAATTGGAAACCAAGTGACTCCATTGCCTGAGCTCATTGCTGAGCCTACTGATGCACGATCTATGTCATTCGTTGGAACCCATGAATACTTGGCACCTGAGATCATCAAGGGAGAAGGTCATGGGAGTGCAGTTGATTGGTGGACTTTTGGAATCTTTCTTTATGAGCTTTTGTTTGGTAAGACTCCCTTCAAGGGATCTGGGAACCGAGCTACGCTGTTTAATGTTGTGGGCCAGCCTCTCCGATTTCCAGAAGCACCTGTTGTAAGTTTTGCAGCAAGGGATCTCATAAGGGGGTTGCTTGTGAAAGAACCACAGCACCGGTTGGCTTATAAAAGAGGCGCTACTGAGATAAAACAACATCCCTTTTTTGAAGGTGTAAATTGGGCACTTATTCGTTGCGCTACCCCGCCAGAGATCCCAAAGCCTGTAGAGTATGAGAAGATACCTTCCCCTGCCTCATCAGCTGTCGAAAAGGCCAGCCACCATATGTCGATTCCTGATCAGAAAGGTTCCGGTAATTATCTTGAGTTTGATTTCTTCTAG 1803 0.4448 MDSRTSARAPQKQHHKTGGIQTIEAKDIKSSKTGKSEYVQDTSKHYIGDTSENKKLGISNSKESADSLISKFGSAVSLSVNEQLAGGVDHVVNGNRGLQESSIDQEKKISEYGSVKSSSVSAKVSDGASSLGKTSGSAKISDRADLVESGKSSICRGSTSSDVSDESTCSSFSSSVNKPHKANDLRWEAIQAVRSKDGVLGLAHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCTVSPTLVKSSVMESDPLRKNAVYCVQPACIEPPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKTEIGNQVTPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEYEKIPSPASSAVEKASHHMSIPDQKGSGNYLEFDFF 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0633 600 Pfam Protein kinase domain 440 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0633 600 Pfam Protein kinase domain 206 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0633 600 MobiDBLite consensus disorder prediction 1 60 - -
Mibi03g0633 600 MobiDBLite consensus disorder prediction 152 173 - -
Mibi03g0633 600 FunFam serine/threonine-protein kinase D6PK-like 289 356 - -
Mibi03g0633 600 FunFam Serine/threonine-protein kinase AGC1-7 436 561 - -
Mibi03g0633 600 SUPERFAMILY Protein kinase-like (PK-like) 182 577 IPR011009 -
Mibi03g0633 600 Gene3D Transferase(Phosphotransferase) domain 1 289 357 - -
Mibi03g0633 600 CDD STKc_phototropin_like 204 562 - -
Mibi03g0633 600 SMART serkin_6 205 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0633 600 Gene3D Transferase(Phosphotransferase) domain 1 437 561 - -
Mibi03g0633 600 FunFam Serine/threonine-protein kinase D6PK-like 203 288 - -
Mibi03g0633 600 PANTHER FLIPPASE KINASE 1-RELATED 33 567 - -
Mibi03g0633 600 Gene3D Phosphorylase Kinase; domain 1 203 288 - -
Mibi03g0633 600 ProSiteProfiles Protein kinase domain profile. 205 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0633 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 326 338 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0633 Mibi-ChrMibi03 8358361 8361134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0633 52 600 AGC Kinase Gene Family AT5G47750 79.928 0.0 871
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mibi03g0633 Pkinase 1.3e-36 CL0016