Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0624 ATGGAAAGAATTAAGAAGGATGAGGAGGGCAGAGCTCAAGAAAAATCTAACAACCTGGCCATGATATCATTGATTCAGAATATATTGGGCCATGAAATTCAAATCCCCCAACCAGCAGCAACCAGCTCAAGAGAGGAGAATGAAGGCGAACCAAATATCCAAAAAGATTTCAAGAGTGATCAGAGTAACAATAGATGGCCGGAAGCCGAAGTTCAAGCACTGATAACTCTAAGAACTTCTTCAGAACACAGATTTCAAGGGACGGGATCCAAAGTATCACTATGGGAGGAGATATCTAAAGCAATGCGTAGTATGGGTTACGATCGATCCGCAAAGAAGTGCAAGGAGAAATGGGAAAATATCAACAAGTATTATAAGAGAACAATGGAGAGTAGGAAGAAGCGAAGACTGAATAGTAAAGCTTGCCCATACTTCGATGAGTTGGACATTCTGTACCGAAACCGGCTCCCAAATACTATTGGGAATGCCTTTAGCGACACCTCAATGTCATCAAAGACTGAAAAGGAACAAAAGTAA 537 0.4134 MERIKKDEEGRAQEKSNNLAMISLIQNILGHEIQIPQPAATSSREENEGEPNIQKDFKSDQSNNRWPEAEVQALITLRTSSEHRFQGTGSKVSLWEEISKAMRSMGYDRSAKKCKEKWENINKYYKRTMESRKKRRLNSKACPYFDELDILYRNRLPNTIGNAFSDTSMSSKTEKEQK 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0624 178 PANTHER FI21293P1 1 173 - -
Mibi03g0624 178 CDD GT1 64 128 - -
Mibi03g0624 178 Gene3D - 66 127 - -
Mibi03g0624 178 FunFam Trihelix transcription factor GT-2 66 127 - -
Mibi03g0624 178 MobiDBLite consensus disorder prediction 36 65 - -
Mibi03g0624 178 ProSiteProfiles Myb-like domain profile. 58 122 IPR001005 -
Mibi03g0624 178 SUPERFAMILY Homeodomain-like 63 161 IPR009057 -
Mibi03g0624 178 SMART sant 62 124 IPR001005 -
Mibi03g0624 178 Pfam Myb/SANT-like DNA-binding domain 64 149 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0624 Mibi-ChrMibi03 8215334 8215870 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0624 65 156 Trihelix Transcription Factor Family AT1G33240 60.870 8.28e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mibi03g0624 Myb_DNA-bind_4 9.4e-23 CL0123