Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0620 ATGGCGACGGAGGAGGAGGGAGGAAAGAAGGAGGGTATCCCGGTGTACACGATAACGAGGATAATGAAGAAGGCGCTACCAGAAGGGGCGAGGATAAGCAATGATGCGAAGGAATATATGGAAGAATGCGTGACAAAGTTCATTAGCTCCATCACCTCGGAGGCGGCTGAAAAGTGCAAGAATGATAAACGCAGGAGGAGGAGGAGGAGGAGAATAGAAGGGGATGACATACTGTACGCCATGAGTAGAAAGCACCTCCATGATTACAAGTATGTCTTGGATATCTACCTTTACAGCTTTCGCCGGTGCTGTCCCGATACTACGCTGCCAGAGGAGAAAACCGCTGATGATGATGATGAACGGAATATTACTTCCGGCGCCGGCGGTGTGGAGGCGAAGAAGAATAAGAGTGACGACGATGAAGATGATGACGATGACGACTGGATCTGA 450 0.4978 MATEEEGGKKEGIPVYTITRIMKKALPEGARISNDAKEYMEECVTKFISSITSEAAEKCKNDKRRRRRRRRIEGDDILYAMSRKHLHDYKYVLDIYLYSFRRCCPDTTLPEEKTADDDDERNITSGAGGVEAKKNKSDDDEDDDDDDWI 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0620 149 PRINTS CCAAT-binding transcription factor subunit A signature 64 82 - -
Mibi03g0620 149 PRINTS CCAAT-binding transcription factor subunit A signature 40 58 - -
Mibi03g0620 149 MobiDBLite consensus disorder prediction 107 149 - -
Mibi03g0620 149 SUPERFAMILY Histone-fold 13 130 IPR009072 GO:0046982
Mibi03g0620 149 MobiDBLite consensus disorder prediction 107 124 - -
Mibi03g0620 149 Gene3D Histone, subunit A 4 148 IPR009072 GO:0046982
Mibi03g0620 149 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 11 138 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mibi03g0620 149 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 13 65 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0620 Mibi-ChrMibi03 8190470 8191573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0620 13 101 CCAAT-HAP3 Transcription Factor Family AT5G47640 49.438 2.14e-25 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mibi03g0620 CBFD_NFYB_HMF 6e-17 CL0012