Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi03g0618 | ATGAAGGAGGTTGTACCAGAAGGGACAAAGATCGACATAGAAACCAAGCAATGTATGCAGAAATGCGCCTCTGAGTTCATCCGTTTCATTGCATCGCAGGCCCTCCACAAGAAACTCCATCATAACAATCACAAATCCATAGAAACCATGGACATCATCAACGCCATCGACACCGTCAACTTCCACGACTACAAATATCAACTCTCCTTCTGCCTCATGTCCGACGAGGAGGAAGATTCCGGTGATACGCCGGCGGAGACAGCCGGTGATGTGGAGGAGGCGGCGGCGGAGGAGGATTGA | 300 | 0.5067 | MKEVVPEGTKIDIETKQCMQKCASEFIRFIASQALHKKLHHNNHKSIETMDIINAIDTVNFHDYKYQLSFCLMSDEEEDSGDTPAETAGDVEEAAAEED | 99 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi03g0618 | 99 | Gene3D | Histone, subunit A | 1 | 99 | IPR009072 | GO:0046982 | |
| Mibi03g0618 | 99 | MobiDBLite | consensus disorder prediction | 76 | 99 | - | - | |
| Mibi03g0618 | 99 | PANTHER | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 1 | 79 | IPR027113 | GO:0001228|GO:0006355|GO:0016602 | |
| Mibi03g0618 | 99 | SUPERFAMILY | Histone-fold | 1 | 82 | IPR009072 | GO:0046982 | |
| Mibi03g0618 | 99 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 1 | 56 | IPR003958 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi03g0618 | Mibi-ChrMibi03 | 8170507 | 8170806 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi03g0618 | 1 | 99 | CCAAT-HAP3 Transcription Factor Family | AT3G53340 | 36.364 | 4.68e-11 | 54.7 |