Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0617 ATGGCGGGAGAGGGAAGCTCCGGTGGTGGTGAAGTGATGGAACTTCTTCCGATGGGAAGTGTAGAAAGAATAATGAAGAAGGTGCTACCAAAGAACATGAAGATAGCGAAAGAAACGAAGGAATGCATGCAAGAATGTGCAACAGAGTTCATACAGTTCGTTACCTGCGAGGCGGCCTACAAGTACAAGCACGCTCTTGTACCCAAATCCATAGACAGCAACGACATACTCTCCGCCATGAACAACCTCGGCCTCCAACATTACTCCCATCTTCTCCACATTTATATTTCAAGGTATTTCCAGTCCCAGGAGTGGTATCAACTCCGCCACCGCAACCGCCTCCGGAAGCGTTCGGACGATACGCCGGAGGAGACCGCTTCCTCATCCTCCTCCGCCGCCGCCGCCGCCGCCGGTGATGTGGAGGCAAAGAAGAATGATACACACCCAGGTCGCAGGCGGTGA 462 0.5303 MAGEGSSGGGEVMELLPMGSVERIMKKVLPKNMKIAKETKECMQECATEFIQFVTCEAAYKYKHALVPKSIDSNDILSAMNNLGLQHYSHLLHIYISRYFQSQEWYQLRHRNRLRKRSDDTPEETASSSSSAAAAAAGDVEAKKNDTHPGRRR 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0617 153 PRINTS CCAAT-binding transcription factor subunit A signature 43 61 - -
Mibi03g0617 153 PRINTS CCAAT-binding transcription factor subunit A signature 82 100 - -
Mibi03g0617 153 PRINTS CCAAT-binding transcription factor subunit A signature 63 81 - -
Mibi03g0617 153 Gene3D Histone, subunit A 11 149 IPR009072 GO:0046982
Mibi03g0617 153 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 13 130 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mibi03g0617 153 MobiDBLite consensus disorder prediction 114 153 - -
Mibi03g0617 153 SUPERFAMILY Histone-fold 15 113 IPR009072 GO:0046982
Mibi03g0617 153 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 16 80 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0617 Mibi-ChrMibi03 8167717 8168178 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0617 15 131 CCAAT-HAP3 Transcription Factor Family AT1G09030 40.171 1.62e-24 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mibi03g0617 CBFD_NFYB_HMF 1.2e-15 CL0012