Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0602 ATGGGTGATCATCATCATCATGAGGCTCAACAAAAACCAGAACAAGAACCCTTATTGCTTTCACTCTCAGGAAACAATCACATTTCTAATCTCAATGATCAGAAGATGAATGACATACAGAGAAGAAGGCGTCCCAGGCATGGCAGTACTGGCTCTTCTTCTGAGAATAATAATATCAACAAGGAAGAAGAAAATCTGATTCATCAAATTCCACCATTACCACACTTAGATTATTCTGATAGTTTCAAATCCAAGAAACTAGTCCTATTCCTCTTATCTGGCTACCTAGGATTAGGAACCCTATCTTTCTTCCTCATAAGGCATCAAATAAAGGGCATAGAGACTAATGGCTTCCTTGATGCCCTTTATTTCTGTGTTGTGACTATGACCACTGTAGGGTATGGTGACCTTGTTCCCAATAGCAAATTGGCAAAACTTCTTGCATGTTTCTATGTCTTCACAGGCATGGCACTTGTAGGGATGATTATGAGCAAAGCGGCGGATTACTTCCTTGAGAAGCAAGAAATCCTATTCGTTCGGGCCATAATCCACATGGGCGAAAAAGTGGGGCCCTTGGAACTGCTTGAAGAGGTTGAGGCACACAAAGTGAAGTACAAGTTCTTTATAGCATCAGCTGTTCTTGTAATGCTTATGATTGTGGGAATTGTTTTTCTGTGTTTGGTTGAGAATTTAGAGTTTGTGGATGCCTTTTATTGTGTTTGTTCTACTATTACTACTTTAGGATATGGTGATAAGAGCTTTTCTACAAATATTGGACGTGGTTTTGCTGTGTTTTGGATATTGAGTAGCACTATTTGCTTGGCTCAGTTTTTCTACTATCTAGCTGAGCTTTATACTGAAGGTAGACAAAAATCTCTGATCAGAACTGTTCTTTCTAGAAAACTATTACGCTCAGATCTTGAGGCTGCAGATCTTGATCATGACAATGCTGTAAGCGCTGCAGAGTTCATTGTATACAAGTTGAAGGAAATGGGAAGGATCAACCAACAAGATATTTCTACGGTGATGGATGCTTTTAGGAAACTTGACTTTGATAAATCAGGAACTCTGACTGAAGCTGATCTCAAATTTTCTGCCTCATCTTGA 1107 0.393 MGDHHHHEAQQKPEQEPLLLSLSGNNHISNLNDQKMNDIQRRRRPRHGSTGSSSENNNINKEEENLIHQIPPLPHLDYSDSFKSKKLVLFLLSGYLGLGTLSFFLIRHQIKGIETNGFLDALYFCVVTMTTVGYGDLVPNSKLAKLLACFYVFTGMALVGMIMSKAADYFLEKQEILFVRAIIHMGEKVGPLELLEEVEAHKVKYKFFIASAVLVMLMIVGIVFLCLVENLEFVDAFYCVCSTITTLGYGDKSFSTNIGRGFAVFWILSSTICLAQFFYYLAELYTEGRQKSLIRTVLSRKLLRSDLEAADLDHDNAVSAAEFIVYKLKEMGRINQQDISTVMDAFRKLDFDKSGTLTEADLKFSASS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0602 368 MobiDBLite consensus disorder prediction 28 59 - -
Mibi03g0602 368 PRINTS Two pore domain K+ channel signature 127 155 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mibi03g0602 368 PRINTS Two pore domain K+ channel signature 245 254 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mibi03g0602 368 SUPERFAMILY EF-hand 299 364 IPR011992 -
Mibi03g0602 368 Gene3D - 298 367 - -
Mibi03g0602 368 Gene3D - 192 295 - -
Mibi03g0602 368 SUPERFAMILY Voltage-gated potassium channels 86 172 - -
Mibi03g0602 368 Pfam Ion channel 95 170 IPR013099 -
Mibi03g0602 368 Pfam Ion channel 213 285 IPR013099 -
Mibi03g0602 368 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 59 341 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mibi03g0602 368 ProSitePatterns EF-hand calcium-binding domain. 350 362 IPR018247 -
Mibi03g0602 368 ProSitePatterns EF-hand calcium-binding domain. 311 323 IPR018247 -
Mibi03g0602 368 Gene3D - 79 176 - -
Mibi03g0602 368 SUPERFAMILY Voltage-gated potassium channels 203 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0602 Mibi-ChrMibi03 7988944 7990633 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0602 67 368 Ion Channels AT5G55630 55.921 1.63e-123 358