Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0597 ATGGGACGTTCACGTGGGAATTTCCACGCTGATGAGGACCCAAATCAAAGGTCAAGGAGAAAAAAGAATGCTGCTAGTGGAGATATTTCGGAACCTGGAGCTGCAGGTCAAGGAACAAGTGAAGGAAAGAAGGCTTTGTACCATTGCAATTACTGTAACAAAGATATTACAGGAAAAATACGTATTAAGTGTGCCATGTGCCCTGATTTTGACCTATGTATAGAGTGCTTTTCTGTGGGAGCTGAGATGACACCTCATAAAAGCCATCACCCGTACAGGGTTATGGACAATTTATCTTTCCCCCTCATTTGCCCAGATTGGAATGCGGATGATGAAATTCTGCTTCTGGAGGTTTCTTCAAATCTATTTCTTCTTACGATTGGAATTGAAATGTATGGCTTGGGGAACTGGGCAGAAGTTGCCGAGCATGTTGGGACAAAGAATAAAGAAGCATGCATAGAACACTATAGGAATGTTTACTTGAACTCGAAAATGTTTCCTCTCCCGGACATGTCCCATGTTGTTGGAAAAAACAGAAAGGAGCTGCTTGCTATGGCTAAAGGGCAAGGCGATGACAAAAAAGGAATTCCTATGGGGGATCTTGGTATAAAGGAAGAATCTCCATTTTCTCCGGCTAGAGTCAAAGTTGAAGATTCTCATAAAGCTGGTAATTCTAGCCGTTTACAGTCCAACTTAAATTCAGAATCAGAATCTGGACCTGCTACTGGCTCGCACACTGTAGCAACTGCTAACCAGAGGGCATCTAATGTTGGACGGGGCAAAGATGGTCCTGGAGTTATCAAAATGGAAGATCCTCAATTAGAAAAATTTTCGGGAGGAAACAAGCCATGTTCCTCTGGAACTGAAGGCCCTTCTTTAGTAGAGATGAGTGGTTATAACGCCAAAAGACAGGAATTTGATCCTGAATATGATAATGATGCTGAACAGTTACTTGCTGAAATGGAATTCAAGGAAACTGACACAGAAGATGAACGGGAACTGAAACTACGCATTCTGCGTATATATTCTAAAAGACTTGATGAAAGAAAGCGTAGAAAGGATTTCATACTTGAAAGAAATTTGTTATACCCAAATCCAATCGAGAAGGATCTAACACCTGAAGAGAGGACAATATGTCGAAAATATGATGCATTCATGCGCTTTCATACCAAGGAAGATCATGAGGAATTGCTTAGATCAGTAATCTCTGAGCACAGAACTCGTAGAAGAATTGAAGAGCTTCAGGAAGCCCAAGCTGCTGGTTGCCGCACAGCAGCGGAAGCAGATAGATATCTTGAACAGAAGAGAAGAAGAGAGGCAGAAGAAAGTGCTCGTAGGTCAAAAGAAAGAGCTCAAGCCGGTCCAAACAATAATGGGGTTCCAAGTGCATTCATGTCTCCAGACTCTGCTGGCAAGGATTCAAGTGCAAGAGCAGCAGGGCCTGCTGGTTCAAGCTCTGTCAATGAAATGGATGTGACAGGATATTATGGGGCTGATCTACTTTCTGTACCTGAAAAACGTCTATGCTGTGAACATAGGTTGCCTCCAGCCATCTTCCTGCAGATGCAAGAGATTCTGTCTTTACAAATAATGAGTGGCAATATCACTGCAAAATCTGATGCTCACCACTTATTCAACATGGAAAGCAGCAAGATTGATTGTGTGTACGATATTCTCGTGAAGAAAGGGATTGCTATGCCCTGA 1704 0.4249 MGRSRGNFHADEDPNQRSRRKKNAASGDISEPGAAGQGTSEGKKALYHCNYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEMTPHKSHHPYRVMDNLSFPLICPDWNADDEILLLEVSSNLFLLTIGIEMYGLGNWAEVAEHVGTKNKEACIEHYRNVYLNSKMFPLPDMSHVVGKNRKELLAMAKGQGDDKKGIPMGDLGIKEESPFSPARVKVEDSHKAGNSSRLQSNLNSESESGPATGSHTVATANQRASNVGRGKDGPGVIKMEDPQLEKFSGGNKPCSSGTEGPSLVEMSGYNAKRQEFDPEYDNDAEQLLAEMEFKETDTEDERELKLRILRIYSKRLDERKRRKDFILERNLLYPNPIEKDLTPEERTICRKYDAFMRFHTKEDHEELLRSVISEHRTRRRIEELQEAQAAGCRTAAEADRYLEQKRRREAEESARRSKERAQAGPNNNGVPSAFMSPDSAGKDSSARAAGPAGSSSVNEMDVTGYYGADLLSVPEKRLCCEHRLPPAIFLQMQEILSLQIMSGNITAKSDAHHLFNMESSKIDCVYDILVKKGIAMP 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0597 567 ProSiteProfiles Zinc finger ZZ-type profile. 44 100 IPR000433 GO:0008270
Mibi03g0597 567 FunFam Transcriptional adapter 40 95 - -
Mibi03g0597 567 SUPERFAMILY Homeodomain-like 123 163 IPR009057 -
Mibi03g0597 567 ProSiteProfiles SANT domain profile. 102 164 IPR017884 -
Mibi03g0597 567 SMART sant 103 162 IPR001005 -
Mibi03g0597 567 PIRSF Txn_adaptor_ADA2 34 566 IPR016827 GO:0003713|GO:0006357|GO:0035065
Mibi03g0597 567 MobiDBLite consensus disorder prediction 435 449 - -
Mibi03g0597 567 MobiDBLite consensus disorder prediction 223 256 - -
Mibi03g0597 567 SUPERFAMILY RING/U-box 47 109 - -
Mibi03g0597 567 CDD ZZ_ADA2 47 95 IPR041983 -
Mibi03g0597 567 Gene3D - 482 565 IPR036388 -
Mibi03g0597 567 Pfam Zinc finger, ZZ type 45 87 IPR000433 GO:0008270
Mibi03g0597 567 ProSiteProfiles Myb-like domain profile. 107 160 IPR001005 -
Mibi03g0597 567 MobiDBLite consensus disorder prediction 186 294 - -
Mibi03g0597 567 ProSiteProfiles SWIRM domain profile. 481 567 IPR007526 GO:0005515
Mibi03g0597 567 CDD SANT 107 159 IPR001005 -
Mibi03g0597 567 MobiDBLite consensus disorder prediction 450 464 - -
Mibi03g0597 567 Gene3D - 101 162 - -
Mibi03g0597 567 SMART zz_5 43 88 IPR000433 GO:0008270
Mibi03g0597 567 MobiDBLite consensus disorder prediction 279 293 - -
Mibi03g0597 567 MobiDBLite consensus disorder prediction 435 486 - -
Mibi03g0597 567 SUPERFAMILY Homeodomain-like 474 564 IPR009057 -
Mibi03g0597 567 Gene3D - 38 95 IPR043145 -
Mibi03g0597 567 FunFam Transcriptional adapter 2 482 566 - -
Mibi03g0597 567 ProSitePatterns Zinc finger ZZ-type signature. 49 76 IPR000433 GO:0008270
Mibi03g0597 567 MobiDBLite consensus disorder prediction 1 41 - -
Mibi03g0597 567 Pfam Myb-like DNA-binding domain 107 159 IPR001005 -
Mibi03g0597 567 MobiDBLite consensus disorder prediction 186 200 - -
Mibi03g0597 567 MobiDBLite consensus disorder prediction 1 26 - -
Mibi03g0597 567 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 47 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0597 Mibi-ChrMibi03 7949689 7955161 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0597 1 564 EF-hand Containing Proteins AT3G07740 46.167 8.60e-153 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi03g0597 Myb_DNA-binding 1e-07 CL0123