Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0576 ATGGTTTCCCTCGAAGATTCTCACTCCAACTCAAACCGCTTCCCTTTAACCAGTACCTATTACTCCACCACCATAACTTCCGCCAACAATTCTTCCTCCAGAATCCAAAGACACATCGGAAGGTCCATGCGAACAATACGCTCCAATTTCTTCCAAGACGACCACACTTGTTCCTTCACTACAGCCACTGATAAATCCACTTGCCTCTCAGAAACCATGACCGATTCTGTCATCGACCTCAGGCTCGGCGAACTCGCTTCAAAAAACAACAACAACAACAACAACAAATCCGCGAAATCCTCTGTTACAGAAGAGGAATTGCTTGATCTCTCTCAAGCTTTCAGTGATTTCTCCGCTTGTAGTAGCGATATCTCCGGCGAGCTTCAGAGACTCGCGTGCTTGCCCTCGCCGGAGATAGAAGGAGATAAGAAAGAACCGTCGCCTGAGGAGCCTTGCCTAGGGTTTCTTCAGAGAGAGAATTTCTCTACTGAGATTATCGAGAGTATTTCCCCTGAGGATCTTCAACCAACGGTTAAGATCTGCATCGACGGTTTACAATCACAGTCAATCGCCGTGAAACGATCCGCCGCAGCGAAATTGAGACTCCTCGCGAAGAATCGTACGGACAATCGAGCTTTAATCGGTGAATCTGGTGCCATCCCTGCCTTAATTCCTCTCCTTCGTTGTAGCGATCCGTTAACTCAGGAACACGCCGTAACGGCTTTGTTAAATCTCTCCCTACACGAAGATAACAAGACGCTGATTACAAACGCAGGAGCGATTAAATCCCTAATTTATGTGCTGAAAACAGGGACGGAGATTTCGAAGCAGAACGCGGCGTGTGCGCTTTTAAGCCTTGCTTTGGTTGAGGAGAATAAGAGTTCGATTGGGGCTAGTGGTGCGATTCCGCCGCTTGTGGCTTTGTTATTGAGTGGTTCTAGCAGGGGGAAGAAGGATGCTTTGACGACGTTGTATAAGCTTTGTTCTGTGAAGGTGAATAAGGAGAGGGCGGTGAGTGCTGGGGTGGTGAAGCCGTTGGTGGAGATGGTGGTGGAGCAAGGGACGGGGTTGGCGGAGAAGGCGATGGTGATATTGAATAGTTTGGCTGGGATTGATGAAGGGAAGGAGGCGATTGTTGAGGAAGGTGGGATTGCTGCTCTTGTTGAGGCTATTGAAGATGGGTCTGTGAAGGGGAAGGAGTTTGCTGTTTTGACACTTTTACAGTTGTGTGTTGATAGTGTGAGGAATAGAGGGTTGCTTGTAAGGGAAGGTGGGATTCCTCCCTTGGTTGCTCTTTCTCAGACTGGAAGTGTTAAAGCTAAGCACAAGGCTGAAACGCTTCTTGGATATTTGAGAGAATCAAGACAAGAAGCATCCACTTCAAGTCCTTAG 1392 0.4799 MVSLEDSHSNSNRFPLTSTYYSTTITSANNSSSRIQRHIGRSMRTIRSNFFQDDHTCSFTTATDKSTCLSETMTDSVIDLRLGELASKNNNNNNNKSAKSSVTEEELLDLSQAFSDFSACSSDISGELQRLACLPSPEIEGDKKEPSPEEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDGLQSQSIAVKRSAAAKLRLLAKNRTDNRALIGESGAIPALIPLLRCSDPLTQEHAVTALLNLSLHEDNKTLITNAGAIKSLIYVLKTGTEISKQNAACALLSLALVEENKSSIGASGAIPPLVALLLSGSSRGKKDALTTLYKLCSVKVNKERAVSAGVVKPLVEMVVEQGTGLAEKAMVILNSLAGIDEGKEAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCVDSVRNRGLLVREGGIPPLVALSQTGSVKAKHKAETLLGYLRESRQEASTSSP 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0576 463 Pfam Armadillo/beta-catenin-like repeat 209 246 IPR000225 GO:0005515
Mibi03g0576 463 Pfam Armadillo/beta-catenin-like repeat 291 329 IPR000225 GO:0005515
Mibi03g0576 463 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 341 383 IPR000225 GO:0005515
Mibi03g0576 463 FunFam U-box domain-containing protein 4 164 316 - -
Mibi03g0576 463 PANTHER U BOX DOMAIN-CONTAINING 118 451 - -
Mibi03g0576 463 SMART arm_5 289 329 IPR000225 GO:0005515
Mibi03g0576 463 SMART arm_5 371 411 IPR000225 GO:0005515
Mibi03g0576 463 SMART arm_5 207 247 IPR000225 GO:0005515
Mibi03g0576 463 SMART arm_5 413 453 IPR000225 GO:0005515
Mibi03g0576 463 SMART arm_5 248 288 IPR000225 GO:0005515
Mibi03g0576 463 FunFam U-box domain-containing protein 4 317 458 - -
Mibi03g0576 463 Gene3D - 162 460 IPR011989 -
Mibi03g0576 463 SUPERFAMILY ARM repeat 175 452 IPR016024 -
Mibi03g0576 463 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 218 260 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0576 Mibi-ChrMibi03 7622331 7624258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0576 49 456 U-box Gene Family AT2G23140 41.026 1.77e-82 265