Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0531 ATGACGTTGGATATCTCCGCCGTCTGTATTTTGCAGCCGCCGATGTATGTTGAGAACGGAGACGGTAACGTGAAGGTTGGCGAGGAGATGTTGATGCCTCCTCTGAACTTTGGGATGGTGGATTATGGTATTTTTAGGTCTGGTTTTCCTGATTCCGCTAGCTTCGGATTTCTCAAAACCCTTCGCCTACGTTCGATTATATGTTTGTTCCCTGATGAGTATCCAGAAGCCAATTCAGAGTTCTTGAAGGCTAATGGAATTAGGCTTTATCAATTTGGAATGGAGGGCTCTAAGGAAATTTCGACAAATGTCCCGGAAGATACAATTCACGAGGCATTGAAAGTTATCCTAGATGTTGGGAACCATCCATTGCTCATTCATTGCAAAAGAGGGAAGCATCGCACTGGTTGTCTTGTGGGATGCTTAAGAAGATTGCAAAGATGGTGTCTGTCATCCATTCTTGATGAGTATCAAAGTTTTGCTGGTGCCAAAGCCAGAGTTTCAGATCAGAGTTTCATAGCAATGTTTGATATTTCTGATTTTAAATCCCAGCCGCTGTCATTTTCTTCATCCTCAGAAAAATACAGCATTGACAAAGTCCAGGATGATGTTCCATCCTCCCCCTGA 627 0.4322 MTLDISAVCILQPPMYVENGDGNVKVGEEMLMPPLNFGMVDYGIFRSGFPDSASFGFLKTLRLRSIICLFPDEYPEANSEFLKANGIRLYQFGMEGSKEISTNVPEDTIHEALKVILDVGNHPLLIHCKRGKHRTGCLVGCLRRLQRWCLSSILDEYQSFAGAKARVSDQSFIAMFDISDFKSQPLSFSSSSEKYSIDKVQDDVPSSP 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0531 208 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 31 177 IPR029021 -
Mibi03g0531 208 Pfam Tyrosine phosphatase family 31 185 IPR004861 -
Mibi03g0531 208 ProSiteProfiles Dual specificity protein phosphatase domain profile. 36 187 IPR020422 GO:0006470|GO:0008138
Mibi03g0531 208 CDD PFA-DSP_Siw14 30 177 - -
Mibi03g0531 208 Gene3D Protein tyrosine phosphatase superfamily 30 180 IPR029021 -
Mibi03g0531 208 ProSitePatterns Tyrosine specific protein phosphatases active site. 126 136 IPR016130 GO:0016311|GO:0016791
Mibi03g0531 208 PANTHER TYROSINE-PROTEIN PHOSPHATASE 29 182 - -
Mibi03g0531 208 PRINTS Plant and fungal dual specificity phosphatase signature 68 81 IPR020428 GO:0016791
Mibi03g0531 208 PRINTS Plant and fungal dual specificity phosphatase signature 104 118 IPR020428 GO:0016791
Mibi03g0531 208 PRINTS Plant and fungal dual specificity phosphatase signature 31 48 IPR020428 GO:0016791
Mibi03g0531 208 PRINTS Plant and fungal dual specificity phosphatase signature 87 101 IPR020428 GO:0016791
Mibi03g0531 208 FunFam probable tyrosine-protein phosphatase At1g05000 30 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0531 Mibi-ChrMibi03 7083689 7086348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0531 27 191 Protein tyrosine phosphatase (PTP) family AT4G03960 65.455 1.66e-81 239