Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0530 ATGGGGAAATCAGGGGGTAGAAAAAAGAAGGGTGGTTCAAATCAAGCTGTTGCTAATAATTCAGCTCCAAGTGCTAATGGGGCTGTGGATTTAGACTATTCAGTCTTGTTGAAAAGAGCCCTTGAACTCAAGGAAGAAGGGAATAAGAGGTTCCAGAACAAGGACTATGCTGGTGCTCTTGAGCAGTATGAGAATGCTCTAAGATTAACCCCTAAGACCCATCCTGAGAGAGCAGTCTTTCATAGCAATAGAGCGGCATGCTTGATGCAAATGAAGCCAATAGACTATGAAACTGTGATTGCTGAATGCACCATGGCATTGCAGGTGCAGCCTCAATTTGTCCGGGCACTTCTTCGAAGGGCTCGGGCATTTGAGGCTATAGGGAAGTATGAAATGGCCATGCAGGATGTTCAAGGCTTACTGGCAGCCGACCCTAATCATAGGGACGCTCTGGAGATTGCCCAGAGACTGAGGACTGCATTAGGTCCTCGCCAGGAAGCTCAGCAGGATCTTCATAGCCGTCCCTCTCCTGCTGCTCTTGGCGCTTCTGCGGTCCGTGGTGCCCCTATTGCTGGTTTAGGTCCATGTTTACCAGCCAGGCCAGCGCCAAAGAAAGCGGCAAACTCAGCGGGCGGATCGGTTGGCCCTCTTAACAGTAAGCCAGAGAGGTCCCAACCAACTCTAGTTACTGAAAATGGTCCCGAGACCAAGTCGCAAATGCCAAAAGTTGCTTTGAAGCCTTCAAATGCTTCAGCAAGATCACTGAATCCTAGAAAAGAGAACTACAATGAACTGTCATCGCATTCACAGCATTTAGAATTTGCAATTCGGTGGAGGCCATTGAAACTTGTTTATGATCATGACATCAGGCTTGCCCAGATGCCAGTGAATTGCAATTTTAGAACTCTAAGAGATGTAGTGAGTAAAAGATTTCCATCATCAAAGTCGGTTCTGATCAAGTATAAGGATAGCGATGGTGATTTGGTGACAATAACTTCTACTGATGAACTTAGACTGGCAGAATCTAATGCTGATAGCCATCTCATAAAAGAGCCTGATGCAGATAAAAGTGATTCGGTTGGCATGTTGAGACTTCATATTGTTGAAGTTAGTCCTGAGCAGGAGCCTCCTTTACCAGAAGAAGAGGAAGTAAAACCTGTTGAGAATGAAGCCATCAAGGGAGATGAGACTGGGTCACATACTTCCCAAAGTGAATCTGTCCCAGAGGCTCTGGAGACTGAGGCTGAAAAGATGGGGAAAGAAGCACCCAAGGAGAAATCAGCAGCTACAGAAGATGCTGAATGCAAGGAAGTGGAGATGGATGATTGGTTGTTTGAATTTGCTCAACTCTTCCGCTCTCATGTGGGTATTGATCCAGATGCTCATATTGACTTGCATGAGCTGGGGATGGAGCTTTGTTCAGAGGCACTTGAGGAAACAGTAACTAGTGAGGAGGCTCAAGATCTTTTTGACAAAGCTGCTTCAAAGTTCCAGGAGGTGGCTGCTTTGGCATTCTTCAATTGGGGAAACATTCACATGTGTGCAGCCCGAAAACGAATTCCCTTAGATGAGTCGGGTGAGAAGGAAAAAGTGGCTGAACAGCTTCAAGTGGCTTATGACTGGGTCAAGGACAAATATTCCTTGGCAAGAAAGAAGTATGAAGAAGCCCTTGTAATAAAACCAGACTTCTACGAGGGATTGCTAGCCCTGGGACAGCAACAGTTTGAAATGGCCAAACTTAATTGGTCATTTGCTCTCGCTAAGAAGATGGATTTATCAGGCTGGGATTCATCCGAGACGCTTCAACTTTTTGACAGCGCGGAGGAGAAGATGAAAGCCGCAACTGAAATGTGGGAAAAGCTGGAGGAACAAAGAGCAAATGAGCTAAAAGATCCCAGTGCAAGCAAGAAAGAGGAATTACTGAGAAGAAGAAAAAACAAGGGAGGTGCTACTGAAGGGGAGGCCTCTGCAGCCGGTGGTCATGGTGAAATATCCGCAGAAGAAGCTGCAGAGCAAGCTGCTGTGATGAGATCACAGATTCACCTCTTTTGGGGGAATATGCTATTTGAAAGATCCCAAGTGGAATGCAAATTGGGAATGGGTGGCTGGAAGGAAAATCTGGATACTGCTGTGGAACGTTTTAAACTTGCAGGTGCTTCTGAGGCTGACATTTCCTTGGTTCTGAAAAATCATTGCTCTAATGGGGATGCAAAGGAAGGAGATGAGAAGAAGATTCAGAACCCTCAACCTAGCAAGACACAAGAAACTGACAAGACCAGTGAGACCAGCCATGTATGA 2298 0.4604 MGKSGGRKKKGGSNQAVANNSAPSANGAVDLDYSVLLKRALELKEEGNKRFQNKDYAGALEQYENALRLTPKTHPERAVFHSNRAACLMQMKPIDYETVIAECTMALQVQPQFVRALLRRARAFEAIGKYEMAMQDVQGLLAADPNHRDALEIAQRLRTALGPRQEAQQDLHSRPSPAALGASAVRGAPIAGLGPCLPARPAPKKAANSAGGSVGPLNSKPERSQPTLVTENGPETKSQMPKVALKPSNASARSLNPRKENYNELSSHSQHLEFAIRWRPLKLVYDHDIRLAQMPVNCNFRTLRDVVSKRFPSSKSVLIKYKDSDGDLVTITSTDELRLAESNADSHLIKEPDADKSDSVGMLRLHIVEVSPEQEPPLPEEEEVKPVENEAIKGDETGSHTSQSESVPEALETEAEKMGKEAPKEKSAATEDAECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQDLFDKAASKFQEVAALAFFNWGNIHMCAARKRIPLDESGEKEKVAEQLQVAYDWVKDKYSLARKKYEEALVIKPDFYEGLLALGQQQFEMAKLNWSFALAKKMDLSGWDSSETLQLFDSAEEKMKAATEMWEKLEEQRANELKDPSASKKEELLRRRKNKGGATEGEASAAGGHGEISAEEAAEQAAVMRSQIHLFWGNMLFERSQVECKLGMGGWKENLDTAVERFKLAGASEADISLVLKNHCSNGDAKEGDEKKIQNPQPSKTQETDKTSETSHV 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0530 765 Pfam PB1 domain 278 369 IPR000270 GO:0005515
Mibi03g0530 765 SMART PB1_new 278 370 IPR000270 GO:0005515
Mibi03g0530 765 MobiDBLite consensus disorder prediction 212 255 - -
Mibi03g0530 765 ProSiteProfiles TPR repeat profile. 114 147 IPR019734 GO:0005515
Mibi03g0530 765 PANTHER PROTEIN CLMP1 1 757 IPR044517 -
Mibi03g0530 765 ProSiteProfiles TPR repeat profile. 40 73 IPR019734 GO:0005515
Mibi03g0530 765 SUPERFAMILY TPR-like 38 171 IPR011990 GO:0005515
Mibi03g0530 765 MobiDBLite consensus disorder prediction 410 433 - -
Mibi03g0530 765 MobiDBLite consensus disorder prediction 1 25 - -
Mibi03g0530 765 CDD PB1 281 340 - -
Mibi03g0530 765 Coils Coil 604 624 - -
Mibi03g0530 765 MobiDBLite consensus disorder prediction 201 255 - -
Mibi03g0530 765 MobiDBLite consensus disorder prediction 624 664 - -
Mibi03g0530 765 MobiDBLite consensus disorder prediction 734 765 - -
Mibi03g0530 765 MobiDBLite consensus disorder prediction 734 748 - -
Mibi03g0530 765 Gene3D Tetratricopeptide repeat domain 37 168 IPR011990 GO:0005515
Mibi03g0530 765 MobiDBLite consensus disorder prediction 394 433 - -
Mibi03g0530 765 MobiDBLite consensus disorder prediction 624 650 - -
Mibi03g0530 765 SUPERFAMILY TPR-like 484 580 IPR011990 GO:0005515
Mibi03g0530 765 SMART tpr_5 40 73 IPR019734 GO:0005515
Mibi03g0530 765 SMART tpr_5 78 113 IPR019734 GO:0005515
Mibi03g0530 765 SMART tpr_5 114 147 IPR019734 GO:0005515
Mibi03g0530 765 Gene3D - 280 350 - -
Mibi03g0530 765 ProSiteProfiles PB1 domain profile. 278 370 IPR000270 GO:0005515
Mibi03g0530 765 SUPERFAMILY CAD & PB1 domains 272 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0530 Mibi-ChrMibi03 7076141 7078438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0530 44 158 Calmodulin-binding Proteins AT3G25230 30.159 3.91e-10 61.2