Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0527 ATGAGTCAACTCGGTGTAATTTTACAGGAATCGCTTCAAAGAGAGCGAGAGGAGAGAACAATTCTAGGTTTGTTCGCAGAGCAAACGGAATCCTCGAACAATAGAGATCCTCCAAGAAGAAGGCGCACTTTAAAAGAACGCCTCAGATTCACCCGAATCGGCTGTTGTGGGGCCACCTGGGGTTTCCCTTCAACACAACAAGAAGAAGAAGAAGACGACGAACGGCAAGAACAGCAGCAAATGCTCCCTAACACAAATCCGGGTCAAAGATCCGACCCGGATTGCCTAGGCCCAGGCCCAAGCCCATCGGGCCCAGGAATGAACCTCGCGGCGGCGCTTGCGGCGGAGCGACAATTCCGGGGGACTCAAGAGGCGGCCGGGGAGAACCCCCGGCGCGGCGGAGGGGTGGTGGGGGTGGGGTCCACGCCGGGGACGCCGTGGAGGGTGTCGTTGATGAGGTTGTTAGAGGAGGGTGAGGGGTGTGACGTGGCAGCGGAGACGGTGACGGTGACGGTGACGGAAGGGGTGGAGGGGAATGATAGGGTGTGCTGCGTGTGCATGGGAAGGAAGAAGGGAGCAGCGTTTATCCCATGTGGGCATACTTTTTGCAGAGTTTGCTCCAGAGAGGTGTGGCTTAATCGAGGCACTTGTCCCCTTTGTAACCGTTCGATCCTCGAGATTCTCGATATCTTCTGA 696 0.5675 MSQLGVILQESLQREREERTILGLFAEQTESSNNRDPPRRRRTLKERLRFTRIGCCGATWGFPSTQQEEEEDDERQEQQQMLPNTNPGQRSDPDCLGPGPSPSGPGMNLAAALAAERQFRGTQEAAGENPRRGGGVVGVGSTPGTPWRVSLMRLLEEGEGCDVAAETVTVTVTEGVEGNDRVCCVCMGRKKGAAFIPCGHTFCRVCSREVWLNRGTCPLCNRSILEILDIF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0527 231 MobiDBLite consensus disorder prediction 22 43 - -
Mibi03g0527 231 MobiDBLite consensus disorder prediction 59 108 - -
Mibi03g0527 231 PANTHER OS01G0917900 PROTEIN 5 231 - -
Mibi03g0527 231 ProSiteProfiles Zinc finger RING-type profile. 183 221 IPR001841 -
Mibi03g0527 231 CDD RING-HC 183 220 - -
Mibi03g0527 231 Pfam Zinc finger, C3HC4 type (RING finger) 180 225 - -
Mibi03g0527 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 177 230 IPR013083 -
Mibi03g0527 231 SUPERFAMILY RING/U-box 168 228 - -
Mibi03g0527 231 MobiDBLite consensus disorder prediction 122 142 - -
Mibi03g0527 231 SMART ring_2 183 220 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0527 Mibi-ChrMibi03 7003127 7003822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0527 35 231 C3H Transcription Factor Family AT4G22250 52.427 3.59e-55 174