Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0516 ATGAAACACAGCGACACTTACACGTCGATTTCTCACGAGACTTACGCCGGCCTCACCGATGAGAAGTCAATGGCAAAAGTCAACGGTTTAGATCCGAACCGGATACCAGAAGGGACTCGGGTCAATGTTAGTGTGAATTGCTCATGTGGTGACTCACACGTGTCAAAGGATTATGGGCTGTTCTTGACGTATCCGGTTGTTTCCGGCGAGGCGTTGGCGGAGGTCGCGGCGGTGAACGGTGTTCCGGCTGATTTGCTTCAGAGGTATAATCCTGGGTCTGATTTCAGTGCCGGCCTTGTGGTGTTTGTGCCGGCTAGAGGAATTTCTGGTGGAACTATTGCTGGTATAGTTGTTGGAAGCATTTCTGCTGGGACCTTATTTTTGGGACTGCTATATTTCAAGCTATGTAGAAGAAAGAGGGTGGAAGATGCATCCATTTTCACAAATCCACTTGCATTTGAAGATAAGAATAATCAACTAGGACGTCGTTCTGGAAGCAACTTAGAGAAGTTATCAGAATTGTCTGGTGGTGCTTCTTCTAGATTGACAGGTATTACAGTGGACAAGTCAGTGGAGTTCTCATATGAGGAGCTTGCTGAAGCTACTAATAGCTTTAGTATGGCTAATAAGATTGGACAAGGAGGCTTTGGAATTGTTTACTTTGCAAAACTTCGAAATGAGAAAGTGGCGATTAAGAAAATGGATATGCAGGCATCAAAAGAATTCCTCAATGAACTGAAGGTTCTTACCCATGTTCATCACCTAAACTTGGTACGATTGATTGGTTATTGTGTTAAGAACTCCTTATTTCTGGTCTATGAGTATATTGAGAATGGAAATCTAAGCCAACATTTACGTGGCTCAGAGAGGGAGCCATTATCATGGTCAAGTAGAGTGCAAATAGCCTTGGATGCAGCAAGAGGACTAGCATACATCCATGAGCAAACAGTTCCTGTCTACATCCATGGAGACATTAAATCTCCAAACATATTGATTGACGAAAACTTTCGGGGAAAGGTTGCAGATTTTGGTCAGACAAATTTGACAGAATGTGGAAGTTCTTCAATGCCATCACATCTTGTGGGCTCTTTTGGCTATATGCCTCCAGAATATGTAAAATATGGCGACTTTTCCCTCAAAACAGATGTATATGCATTTGGAGTTGTTCTCTATGAACTCATATCTGCAAAGGAAGCTATTGTAAAGACAAAAGAGCTTGTGAATGAATCAAAGGGACTTGTTGCCTTGTTTGAAGAGGTTCTGAATCAGCAAAACCCAGAAGAAAACGTTCGTGACCTTGTTGACCCCAAGCTTGGTGACAACTACCCTCTTGACTCAGTATATAAGATGTGTCAGCTAGCGAAAGCTTGCACACAAGAAAATCCCCAAGTAAGGCCAAGCATGAGATCAATTGTAGTCGCATTGATAATACTGTCCTCTCCAATGGAGGACTGGGATGTGGGCTCCTTCTATGCAAACCAAGCACTCATTCATCTCACATCGGAAAGGCCTCAAAAGGCAACGAATCCTCTAGTCCCTACTCACCCAACGATACCCTTATTCATCGATTCACAAATTACTTTACTACTTCACTCCACACTGTTTGTTTGTGTGTCTCACCGGCCGGAAAATCACAATACTGCTTTTGTTCTTTTCTTTCTGTGA 1665 0.4294 MKHSDTYTSISHETYAGLTDEKSMAKVNGLDPNRIPEGTRVNVSVNCSCGDSHVSKDYGLFLTYPVVSGEALAEVAAVNGVPADLLQRYNPGSDFSAGLVVFVPARGISGGTIAGIVVGSISAGTLFLGLLYFKLCRRKRVEDASIFTNPLAFEDKNNQLGRRSGSNLEKLSELSGGASSRLTGITVDKSVEFSYEELAEATNSFSMANKIGQGGFGIVYFAKLRNEKVAIKKMDMQASKEFLNELKVLTHVHHLNLVRLIGYCVKNSLFLVYEYIENGNLSQHLRGSEREPLSWSSRVQIALDAARGLAYIHEQTVPVYIHGDIKSPNILIDENFRGKVADFGQTNLTECGSSSMPSHLVGSFGYMPPEYVKYGDFSLKTDVYAFGVVLYELISAKEAIVKTKELVNESKGLVALFEEVLNQQNPEENVRDLVDPKLGDNYPLDSVYKMCQLAKACTQENPQVRPSMRSIVVALIILSSPMEDWDVGSFYANQALIHLTSERPQKATNPLVPTHPTIPLFIDSQITLLLHSTLFVCVSHRPENHNTAFVLFFL 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0516 554 Gene3D Phosphorylase Kinase; domain 1 178 275 - -
Mibi03g0516 554 FunFam PTI1-like tyrosine-protein kinase 3 276 489 - -
Mibi03g0516 554 FunFam LysM receptor kinase 2 184 275 - -
Mibi03g0516 554 ProSitePatterns Protein kinases ATP-binding region signature. 211 233 IPR017441 GO:0005524
Mibi03g0516 554 SMART serkin_6 205 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0516 554 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 2 489 IPR044812 GO:0019199|GO:0045087
Mibi03g0516 554 Gene3D Transferase(Phosphotransferase) domain 1 276 479 - -
Mibi03g0516 554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 320 332 IPR008271 GO:0004672|GO:0006468
Mibi03g0516 554 SUPERFAMILY Protein kinase-like (PK-like) 184 477 IPR011009 -
Mibi03g0516 554 ProSiteProfiles Protein kinase domain profile. 205 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0516 554 Pfam Protein tyrosine and serine/threonine kinase 207 474 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0516 Mibi-ChrMibi03 6726872 6741358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0516 1 503 Receptor kinase-like Gene Family AT3G21630 55.106 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mibi03g0516 PK_Tyr_Ser-Thr 2.9e-47 CL0016