Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0514 ATGGAGGTGTTTTCATCTAATGCTTTTGAAGTTCCAAGGAGGAGAAGCGTTCGAGAGAGAAGTAGGTATCCTCTAAGTTCTGAAGAGGAAGGAGATATTCTATATTGCTCAGAGATGAGGCCCACTTCTTCATGCAAAAGAGAGGATCAACCACAGAAATCTATTGCCTCCTCAAAAAGGAAAAGGAATCAGCAGAATGATTTTTTGGTTGATGAATCAGATGATGATGAGGAAACTTTGCTTGCCATGATGAGATCCAGGAGTAGAGCTCGTAGGATGGACCTTAAGATGGATAAAATAGGCTCAGAATCAAGTGGAGAGAGTCCATCTTCCAGCATTACATCATCCAATTCTCCACCAGCATCCACATTGCCCACTTCGGATTCAATAAACCATATTACGGATGATTGCCTTACGACAAGTAGGAAGGCTACTGGGAGAGGTGGTTGGATATGTCATCAGTGCATGAAAAAGGATAGATTAAGCTATGTCCCTTGTACCAGATGTGAACAAAAATTATACTGTGATAAGTGTATCAAACAATGGTATCCTGATATGACAATACCAGAAATTGCGGAGTGTTGCCCATTTTGCCGTAAAATTTGCAATTGCAATGCCTGCTTGCGCTCAAGTGGGATGATTAAGACATCTATCAAAGATATCTCTGATAATGAGAAGTTTCAGTGTCTGCACTATTGCATCAACTTACTTCGTCCATTTCTGAAACAAATTTGTGAGGAACAAGCTCTAGAGGAAGACATTGAAGCTAGAATACAAGGGACATCACGTTCTGAGATTGAGATGCTGCAAACAACATGTAGTGACGAAGAGCGTGTCTATTGCGACCATTGTGCTACTTCAATTGTTGACCTTCACCGCAGCTGCCCTGAGTGTTCCTATGAACTCTGCCTTCAATGTTGCCAAGAAGTTCGCAATGGGACCATTTCAACTCGAGCTGAAATGAGGTTTCAGTATGTGAACAAGGGTTATGATTATATGCATGGTGGTGATCCTTTGCTGGATTCTTGTCGTTCCAAGACTTCAGATGATCCTTGCATTGAGCAATCTATTGAGTGGACTGCAGAAAGCAATGGAAGCATTTTTTGTGCCCCGAAGGAGTTTGGGGGATGTGGAAACTGCATGTTGGAGCTCAAACATATTCTTCCTCGGGGCTGGATATCTGAACTTGAAGCTAAAGCTGGTGATTTGTTGAGTAACTGTGTGACTAAACAAACTCTTCTGAAGGACAAAGCAGCAGCAGCTGCAAGCTGCAACTACTCTGTGAGAAGAGCTGCTTCTAGAAAAGGCAGTGAAGACAATGACATTTACTGCCCTTCTTCTAGGGAGATCATAAATGAGGGGTTATCAATCTTTCAAAAGCATTGGATTAGTGGTGAACCTGTTATAGTTCGTGATGTTCTTCAGCAAGCAACAGGTTTAAGCTGGGAGCCCATGGTTATTTGGAGGGCAGTATGCCCGGCTTCAGATTCAAACGTCAACCCAAAAATGTCAGAAGTTAAGACCATTGATTGTCTTGCTGGTTGTGAGGTAGAAATCAGCGCTCACAAGTTCTTTAAAGGTTATATGGAAGGAAGAACATATAGAAATCTCTGGCCAGAGATGCTAAAGCTTAAAGACTGGCCTCCCTCTGATAAGTTTGAAGACCTTTTGCCTCGCCACTGTGATGAGTTTATTCGCTCCTTACCATTTCAAGAATACACTGATCCTCGGGCTGGAATCCTCAATCTTGCTGTCAAGTTGCCAATCCATGTCTTGAAACCAGACATGGGTCCAAAAACATATATTGCTTATGGAATAAAAGAAGAACTTGGCAGAGGGGATTCTGTAACAAAGCTTCATTGTGACATGTCTGATGCGGTGAATATTTTGACCAATACAGCAGAAGTAAAGTTAAATGATGAGCAAAGCTTTTCTATTTCAAAGCTGAAAATAGCACACAAGGCCCAAGATGAAAAAGAAAAGTGCTGTGCCAAAATCAACGGAAATATCTCTCCAATTGATGTGCCTGAAAGGGTCACATCTCTTGATGTCCCTGCAGAAAATGAAATAAGAGAAGAAGGTGCTGCTCTTTGGGACATTTTCAGAAGAGAAGATACTCAGAAGTTAGAAACTTATTTAATGAAACACTCAAGAGAGTTCAGACATACTTTTTGTTCTCCAGTTGAACAGGTTTTCCATCCGATTCACGATCAATGTTTTTATTTAACAATGGAGCACAAGAAGAAGCTGAAGGAGGAATTCGGTGTTGAACCGTGGACATTTGAGCAGAAACTTGGGGAGGCTGTATTTATCCCTGCTGGATGCCCTCACCAAGTTAGAAATCTCAAGTCTTGCACAAAAGTTGCTATGGATTTTGTGTCCCCAGAAAACCTTGACGAGTGTCTGCATTTAACTAATCAGTTCCGGCAGCTTCCCAAGAACCACAGGGCCAGAGAAGATAAACTTGAGATAAAGAAGATGATAGTCTATGCTGCTGACCAAATTCTCAGAGATTTTGAATCCTTGCTCGGTTGTGCTTGA 2541 0.4176 MEVFSSNAFEVPRRRSVRERSRYPLSSEEEGDILYCSEMRPTSSCKREDQPQKSIASSKRKRNQQNDFLVDESDDDEETLLAMMRSRSRARRMDLKMDKIGSESSGESPSSSITSSNSPPASTLPTSDSINHITDDCLTTSRKATGRGGWICHQCMKKDRLSYVPCTRCEQKLYCDKCIKQWYPDMTIPEIAECCPFCRKICNCNACLRSSGMIKTSIKDISDNEKFQCLHYCINLLRPFLKQICEEQALEEDIEARIQGTSRSEIEMLQTTCSDEERVYCDHCATSIVDLHRSCPECSYELCLQCCQEVRNGTISTRAEMRFQYVNKGYDYMHGGDPLLDSCRSKTSDDPCIEQSIEWTAESNGSIFCAPKEFGGCGNCMLELKHILPRGWISELEAKAGDLLSNCVTKQTLLKDKAAAAASCNYSVRRAASRKGSEDNDIYCPSSREIINEGLSIFQKHWISGEPVIVRDVLQQATGLSWEPMVIWRAVCPASDSNVNPKMSEVKTIDCLAGCEVEISAHKFFKGYMEGRTYRNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIRSLPFQEYTDPRAGILNLAVKLPIHVLKPDMGPKTYIAYGIKEELGRGDSVTKLHCDMSDAVNILTNTAEVKLNDEQSFSISKLKIAHKAQDEKEKCCAKINGNISPIDVPERVTSLDVPAENEIREEGAALWDIFRREDTQKLETYLMKHSREFRHTFCSPVEQVFHPIHDQCFYLTMEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAMDFVSPENLDECLHLTNQFRQLPKNHRAREDKLEIKKMIVYAADQILRDFESLLGCA 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0514 846 MobiDBLite consensus disorder prediction 103 128 - -
Mibi03g0514 846 ProSiteProfiles Zinc finger RING-type profile. 152 199 IPR001841 -
Mibi03g0514 846 MobiDBLite consensus disorder prediction 1 128 - -
Mibi03g0514 846 CDD cupin_RmlC-like 732 781 - -
Mibi03g0514 846 Pfam JmjC domain, hydroxylase 696 792 IPR003347 -
Mibi03g0514 846 MobiDBLite consensus disorder prediction 12 27 - -
Mibi03g0514 846 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 149 218 IPR018866 -
Mibi03g0514 846 SMART cupin_9 557 809 IPR003347 -
Mibi03g0514 846 FunFam Transcription factor jumonji domain-containing protein 439 818 - -
Mibi03g0514 846 MobiDBLite consensus disorder prediction 79 101 - -
Mibi03g0514 846 MobiDBLite consensus disorder prediction 42 56 - -
Mibi03g0514 846 SUPERFAMILY Clavaminate synthase-like 454 831 - -
Mibi03g0514 846 Gene3D Cupin 444 818 - -
Mibi03g0514 846 ProSiteProfiles JmjC domain profile. 576 809 IPR003347 -
Mibi03g0514 846 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 48 842 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0514 Mibi-ChrMibi03 6678985 6686494 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mibi03g0514 JmjC 4e-14 CL0029