Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0500 ATGGGGTGGACTAGGGGTTGTACCATTGGCCGGGGATCTACAGCCACCGTGTCGGTTGCTGAATTTCATGGGTCCCATAGGAAGCTCGCCGTGAAGTCAGTGGAGCTTGATCGTTCGGAATTTTTAAGGAGAGAACGGAGTATTATGTCCACATTGGAGTGTCCTCAAATTGTGTCATATGAAGGGTGTGACACAACATTTGAAAATGGTGTGTTCATGTACAACTTGTTCATGGAGTATGCGCCGTACGGGTCAATTGCTGACGAAATTCGCAAGCTTGATGGTGGATTGGATGAATTTGTGGTTAGATGTTATGCTCGTCAGATTCTGCTTGGTTTGGATTACTTGCATTCCAATGGGATCGTTCATTGTGATTTGAAAGGACAAAATGTTTTGATTTTTGATGATGGGGTTAAAGTTGCAGACTTTGGTTGTTCCCGGAGAATTTCGCCGCCGGCGGAGGCGGCGGCGGTCACCGGAACTCCGGCGTTCATGGCGCCGGAGGTGGCGCGTGGGGAGAGGCAAGATTTTTCTGCTGATGTGTGGGCTCTTGGATGCATTGTGTTGGAGATGATCACCGGAAAATCGCCGTGGCACGGCGTTTCCGACCCGGTTAGCGTGCTATATCGGGTCGGGTTCGCCGGCGATGCGCCGGAGATTCCGGATTCCTTGTCGGATCAAGGGAAGGATTTTGTTGCCATGTGTTTGAAAACAGATCCAAATGAGAGGTGGTCAGCTAGTGAGCTTCTTAAACATGAGTTTGTTAAGGATTCAAGAAATGTCTTGAAGAGATTTGATGATTCTAGTTCAAATTCTCCAACTAGTGTGTTGTTGGGTCAAGGTTTCTGGGATTCAGTTGTCGGGTCGCAGGAAACCCGAACACTGGGTCCGGATCCGGATCCGACCCGTGATCATGTCTTTTCTTGGGATCTTCCTAGTCCCAGAAGTAGAATTGGTATATTGTGTTCTTCTTCTATACCCAATTGGGAATGTGATGAACAATGGATCACAGTAAGAGAAAGCAGCATAAGAGACTCAGGGAGACTCTTCAATGGCCAAGAATCTAATGAAGAAACAGAGAATTGTGGGTTAGACAGTTCAAATTACATTAGGGAGGACAATTTTTTGGTTGTTACTGATGAACCAGGAACAGTTAGTATAGTTGAATTGAGTGAGTTTTGTAATATTAATGATGATTATTGTAGCAGAGAATCTTTATTCTTATGTTCACAATGTATAATTGTGGTTTGCAATAGAAATGTTTTACATGACTTGTTTTCAGCTTCCACTCTCTAA 1296 0.4498 MGWTRGCTIGRGSTATVSVAEFHGSHRKLAVKSVELDRSEFLRRERSIMSTLECPQIVSYEGCDTTFENGVFMYNLFMEYAPYGSIADEIRKLDGGLDEFVVRCYARQILLGLDYLHSNGIVHCDLKGQNVLIFDDGVKVADFGCSRRISPPAEAAAVTGTPAFMAPEVARGERQDFSADVWALGCIVLEMITGKSPWHGVSDPVSVLYRVGFAGDAPEIPDSLSDQGKDFVAMCLKTDPNERWSASELLKHEFVKDSRNVLKRFDDSSSNSPTSVLLGQGFWDSVVGSQETRTLGPDPDPTRDHVFSWDLPSPRSRIGILCSSSIPNWECDEQWITVRESSIRDSGRLFNGQESNEETENCGLDSSNYIREDNFLVVTDEPGTVSIVELSEFCNINDDYCSRESLFLCSQCIIVVCNRNVLHDLFSASTL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0500 431 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 359 - -
Mibi03g0500 431 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Mibi03g0500 431 Gene3D Transferase(Phosphotransferase) domain 1 88 277 - -
Mibi03g0500 431 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Mibi03g0500 431 Pfam Protein kinase domain 7 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0500 431 ProSiteProfiles Protein kinase domain profile. 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0500 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Mibi03g0500 431 CDD STKc_MAPKKK 3 255 - -
Mibi03g0500 431 SMART serkin_6 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0500 431 SUPERFAMILY Protein kinase-like (PK-like) 3 273 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0500 Mibi-ChrMibi03 6545944 6547239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0500 1 339 MAP Kinase Kinase Kinase AT1G05100 49.858 8.02e-101 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mibi03g0500 Pkinase 2.7e-54 CL0016