Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi03g0471 | ATGGACGCCAATGATGACGTTTCATCATCTTCAATTTTCAGGGAAATCTCCAATTTCAAAACCCCCAAACGTCCCTCTCACTATAAAAACCCTAATTTTCAATCCCCTTCTGAGAATTTCTTCACCGCCAAAAACAACAATCAAACGCCGTACTTCTCCGCGTTTCGTGGTGGCCGGCCTTCATCATCAGCTCGAACCAAGAAATCAACGGCGGCCGCGGCTAAGAAACTTAAGGCATTCGAACTCGAACAGTCTCAATCATCGAGGAAAGCTCAAGTTAAGAAAGTAAAATCCCTTAAATCTCTAGCCAAATCTATCACCGTTTGGCTTAATTTCTTGTTCGAATGCCCTGCTACTTGTGGATGTAATTTGTCGATCGGAGGGATTCAGATTGGGGATAACAATTGTGAAGTGGAGGCTATGAAGGGTAAGAGGGATAACGGTAATAGGATTTCTGTTGGGGTTGATAAAGCATGGCGTACACCAAAGAGACAGAGGAAGATGTGGTCTCGGGTAGAAGAGAGTGTGGGTACTGAGAATGTGCCCTTGGAATTTCCAAATTCTATGTTTTTGTGCTTGAGGCAATCTCTGGAGGATGTTTGTAGTTTCGATGATTTGAAGCAGCGGATGGGGGTTTATTTGAATTTGGGAAGTTGTAAAGAGATTTTTGAAGTTATGAATCAAGTTACCAAGGTAATTCACGGAGAAGGAAATCTTCTGGCTCATTTAGTGATAATTGGTTACAAAGTATCTCATCATCAGGGGCCACTGGTCGAGTATGATTTCAAGGTCAGAGATTTATTTAAAGATTTCCAAGATGGGTTAAAGCTCTGTAGAGCCATACAGCTCTTGACGAATGATGCTTCTATCCTCACGGTTGTTCCCTCAGATACTTATAAGAAGAACTTAGCCAACTGTGTCCTTGCCCTTCAATACATTAAGCAAGCTGGTGTGTCACTACATGATGAGGATAACATGATGATTGTAGCAGAAGATGTTGCCAATGGTGACAAAGAACTTGTTCTCTCGTTGCTGTGGAATATCTTTGTTCACTTGCAGGATGCCATTAACAATGCGAATTCAAGTTCATTGGAATTGCTTTTGAATTGGATTCAGGCAGTTTGTGAAAATTATGATTGTGGGATAGACAATTTTGATTCATTAGTGGATGGAAAAGCTATATGGATGGAGCAGTGTCTTTCTAACTCTGGAGCAGTACAGAAGCCGGACGCTTCTGATGTGCATGAAAACGAAGATGCTGCAAGAAAATTCAAGGCCATCCAGGCTTGGTGGCAAGATATGACTGAAAGAAATCAGAAATCTTACATGAAACCGGCTGTATGCAGACCCATAGATGGCAGCGCCAACATCAGAAGAGCCTTGTCCCTTGAACATTTGTACGTAATTTGGTTGAGTACTCATGGCATGTTTTGCTTGTTCATTTGTGTAGCAATAACCAAGAAGTCAGAAACATATAAGAGATATGCCATGTTCTTCGTTCATAGGCACTCTTTTCTGAAGTTAAAGAGGGCCGCATTACTTATCCAGCAAGCAGTAAGAAGTTGGCTCTCTTGGAGGCATCAAGTGGCTGCTGCCAATGTTGTTCAGAAATTTGTTCGTGGTTGGATGGCACGATCTAGATATAATCATATGCTTGATCAGCAAGAGAAAGCTTCATATTTGTACTCACAAAAGGTTATGTTTGAGCTTCAAACAAAAGCTGCCATCAGGATTCAGCTTGCTTGGAAGAGGTATATGTGCTGCAAGTCTGCTCAGAAACACTTCTATGCAACAATAATTCAAAGCAACTTTCGGATGTGGCGACTAAGAAGAATATATTTGAATAAGATTCATGCGGTTTTGAGAATCCAAAGTTATTTCCGAATGTCAGCAAGTGTAAAGACTTTTCAACGCTTGAAAAAGACATTTAAGGCAGCCATTATCATTCAGTCTTTCACACGTGCATGGATTGCACGGAAGGAAGAGAAGGCTTTGTATTTGTACTCACAAAAGGTTATGTTTGAACTTCAAGCAAAAGCAGCCATGAGGATTCAGCTTGCTTGGAAGAGGTATATGTGCTGGAAGTCTGCTCAGAAGCACTTTTATGCAACAATAATTCAAAGCAATTTTCGTAGGTGGCGGTTAAGAAGAATATATTTGAATCAGATTCAAGCTGCTTTGAGAATCCAAAGTTATTTCCGAATGTCAGAAAGTGTAAGGACTTTTCAACGCTTGAAAAAGACATTTAAGGCAGCCATAATCATTCAGTCTTTCACACGTGCATGGATTGCACGGAAGGAAGAGAAGGTTTCATATTTGTACTCACAAAAGGTTTTGCTTGAACTTCAAACAAAAGCAGCCATGAGGATTCAGCTTGCTTGGAAGAGGTATATGTGCTGGAAGTCTGCTCAGAAGCACTTCTATGCTACAATAATTCAGAGCAATTTTCGTAGGTGGCGGTTTAGAAAAATGTATGTGAATCAAATTCAAGCTGTTTTGAGAATCCAAAGTTATTTCCGAATGTCAGCAAGTGTAAAGACTTTTCAACACTTGAAAATGACATTGAAGGCGGCAATTATCATTCAGTCTTTCGCACGTGCATGGATAGCACAGAAGGAAGCTTATGCACTTAAAAGTCGCATCATTTCAATTCAAATGCAGTGTTGCAGATTCAGCGTTTTATTAGGGGGAGGTGCATGTGGACAACGCGATATGATACTAAGTGGTTGCATTTTAGGATCAGTTGGTTACTCTAAATTTCAACTGGAACTAGTATTGCGTTCTGTCCTGAAATTGCAGCGATGGTGGAAGGGTGCCTTGTTACACAAGTTAAGAACAAAGTCTGTGATTATAATCCAGTCTTGTGCTCGTGGCTGGCTCGCTAGGCGAATGGCAACTGTTCGCAGACACCATGTTGTTGTCATTCAATCCCACTGGAAAGGTTACGTTGCTCGGAAAGAGTCAAAAGAGCAGCTGCGAGACTTGCGCCTGAGAGTGAAGGAGTCTGCCAGAAATGTGGACGACAGCAAGCGTCTCATAAACAGACTTCTCGTAGCGCTTTCAGAGCTACTTCACATGAAGAGTGTCAGTGGCATCCTTCATACTTGTGCAACCTTGGGTGAGAACAACAATATATTATTGGAATTTGTTACTATCATTTTAATCTTCTTCACAGATGTGGCTACAGAACATTCTCAGAGGTGTTGTGAAGAACTTGTCGCAGCAGGGGCTATTGACAAGTTGCTCACGCTTATTTGCTCAGTGAGCCGAAGTATACCTGATCAGGAAGTTCTTAAGCATGCTTTGTCAACTTTGCGAAATCTAGCCCGCTACCCTCACCTACTTGAATTGCTGATCCAATGCAACGGTTCTATCCAGACAATTCTCTGGGAATTCCTGAGGAATAAGGAGGAGAGTTACTTTATTGCTTCTGAAATTCTTATGAAGATATCTTCAACTCCTAAAGGTGTTGACTCGTTACGCAAGTTACCTGCTCTGGTAAAACGACTGCATGCTCTTGTTGAGGACCTTACACGGAAGGCAATCTACGAGAAAAGAAGTGGCAGAGCTCATAGTGCAGTAATAAAAGAGAATAGAGAGAGGAGATTAAAGGAGGCTGCTGGGATTCTCAAACTAATAACAAGTGCCTAA | 3651 | 0.4144 | MDANDDVSSSSIFREISNFKTPKRPSHYKNPNFQSPSENFFTAKNNNQTPYFSAFRGGRPSSSARTKKSTAAAAKKLKAFELEQSQSSRKAQVKKVKSLKSLAKSITVWLNFLFECPATCGCNLSIGGIQIGDNNCEVEAMKGKRDNGNRISVGVDKAWRTPKRQRKMWSRVEESVGTENVPLEFPNSMFLCLRQSLEDVCSFDDLKQRMGVYLNLGSCKEIFEVMNQVTKVIHGEGNLLAHLVIIGYKVSHHQGPLVEYDFKVRDLFKDFQDGLKLCRAIQLLTNDASILTVVPSDTYKKNLANCVLALQYIKQAGVSLHDEDNMMIVAEDVANGDKELVLSLLWNIFVHLQDAINNANSSSLELLLNWIQAVCENYDCGIDNFDSLVDGKAIWMEQCLSNSGAVQKPDASDVHENEDAARKFKAIQAWWQDMTERNQKSYMKPAVCRPIDGSANIRRALSLEHLYVIWLSTHGMFCLFICVAITKKSETYKRYAMFFVHRHSFLKLKRAALLIQQAVRSWLSWRHQVAAANVVQKFVRGWMARSRYNHMLDQQEKASYLYSQKVMFELQTKAAIRIQLAWKRYMCCKSAQKHFYATIIQSNFRMWRLRRIYLNKIHAVLRIQSYFRMSASVKTFQRLKKTFKAAIIIQSFTRAWIARKEEKALYLYSQKVMFELQAKAAMRIQLAWKRYMCWKSAQKHFYATIIQSNFRRWRLRRIYLNQIQAALRIQSYFRMSESVRTFQRLKKTFKAAIIIQSFTRAWIARKEEKVSYLYSQKVLLELQTKAAMRIQLAWKRYMCWKSAQKHFYATIIQSNFRRWRFRKMYVNQIQAVLRIQSYFRMSASVKTFQHLKMTLKAAIIIQSFARAWIAQKEAYALKSRIISIQMQCCRFSVLLGGGACGQRDMILSGCILGSVGYSKFQLELVLRSVLKLQRWWKGALLHKLRTKSVIIIQSCARGWLARRMATVRRHHVVVIQSHWKGYVARKESKEQLRDLRLRVKESARNVDDSKRLINRLLVALSELLHMKSVSGILHTCATLGENNNILLEFVTIILIFFTDVATEHSQRCCEELVAAGAIDKLLTLICSVSRSIPDQEVLKHALSTLRNLARYPHLLELLIQCNGSIQTILWEFLRNKEESYFIASEILMKISSTPKGVDSLRKLPALVKRLHALVEDLTRKAIYEKRSGRAHSAVIKENRERRLKEAAGILKLITSA | 1216 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi03g0471 | 1216 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - | |
| Mibi03g0471 | 1216 | ProSiteProfiles | IQ motif profile. | 616 | 645 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | ProSiteProfiles | IQ motif profile. | 945 | 972 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 927 | 991 | IPR027417 | - | |
| Mibi03g0471 | 1216 | Pfam | Calponin homology (CH) domain | 263 | 353 | IPR001715 | GO:0005515 | |
| Mibi03g0471 | 1216 | ProSiteProfiles | IQ motif profile. | 968 | 996 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | SMART | arm_5 | 1065 | 1110 | IPR000225 | GO:0005515 | |
| Mibi03g0471 | 1216 | ProSiteProfiles | IQ motif profile. | 722 | 751 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | Coils | Coil | 985 | 1005 | - | - | |
| Mibi03g0471 | 1216 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 1076 | 1123 | IPR000225 | GO:0005515 | |
| Mibi03g0471 | 1216 | Gene3D | - | 747 | 802 | - | - | |
| Mibi03g0471 | 1216 | SUPERFAMILY | ARM repeat | 1041 | 1177 | IPR016024 | - | |
| Mibi03g0471 | 1216 | Pfam | IQ calmodulin-binding motif | 972 | 987 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | Pfam | IQ calmodulin-binding motif | 750 | 768 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | Pfam | IQ calmodulin-binding motif | 644 | 662 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | Pfam | IQ calmodulin-binding motif | 946 | 963 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | Pfam | IQ calmodulin-binding motif | 703 | 719 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | Pfam | IQ calmodulin-binding motif | 597 | 613 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | Pfam | IQ calmodulin-binding motif | 530 | 548 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | Pfam | IQ calmodulin-binding motif | 856 | 873 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | ProSiteProfiles | IQ motif profile. | 528 | 557 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | ProSiteProfiles | Calponin homology (CH) domain profile. | 216 | 353 | IPR001715 | GO:0005515 | |
| Mibi03g0471 | 1216 | SUPERFAMILY | Calponin-homology domain, CH-domain | 234 | 395 | IPR036872 | - | |
| Mibi03g0471 | 1216 | ProSiteProfiles | IQ motif profile. | 750 | 777 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | Gene3D | - | 994 | 1215 | IPR011989 | - | |
| Mibi03g0471 | 1216 | Gene3D | - | 248 | 356 | IPR036872 | - | |
| Mibi03g0471 | 1216 | Pfam | Armadillo/beta-catenin-like repeat | 1066 | 1110 | IPR000225 | GO:0005515 | |
| Mibi03g0471 | 1216 | ProSiteProfiles | IQ motif profile. | 828 | 857 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | PANTHER | UNCHARACTERIZED | 31 | 233 | - | - | |
| Mibi03g0471 | 1216 | Gene3D | - | 527 | 594 | - | - | |
| Mibi03g0471 | 1216 | Gene3D | - | 943 | 993 | - | - | |
| Mibi03g0471 | 1216 | Gene3D | - | 698 | 746 | - | - | |
| Mibi03g0471 | 1216 | Gene3D | - | 805 | 855 | - | - | |
| Mibi03g0471 | 1216 | Gene3D | - | 595 | 643 | - | - | |
| Mibi03g0471 | 1216 | SMART | iq_5 | 641 | 663 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | SMART | iq_5 | 703 | 720 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | SMART | iq_5 | 507 | 529 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | SMART | iq_5 | 597 | 614 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | SMART | iq_5 | 676 | 698 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | SMART | iq_5 | 809 | 826 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | SMART | iq_5 | 721 | 743 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | SMART | iq_5 | 570 | 592 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | SMART | iq_5 | 615 | 637 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | SMART | iq_5 | 747 | 769 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | SMART | iq_5 | 827 | 849 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | SMART | iq_5 | 782 | 804 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | SMART | iq_5 | 944 | 966 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | SMART | iq_5 | 530 | 549 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | SMART | iq_5 | 967 | 989 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | SMART | iq_5 | 853 | 875 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | ProSiteProfiles | IQ motif profile. | 644 | 671 | IPR000048 | GO:0005515 | |
| Mibi03g0471 | 1216 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 777 | 884 | IPR027417 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi03g0471 | 623 | 767 | Myosins gene family | AT1G17580 | 32.237 | 3.05e-07 | 53.1 |