Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0466 ATGGATTGTTTCCCATGTTGCCATAAGCATGAACTTGAAAGGGCTCCTATGAGCAGAAATTCCATTGATTATGCACATTCCAGGAAATCCACAATCAAATCTTTTCTTGGGGCTCTCTCTTCCAAATCAGGTAGCAGAAGACAAAGACAAATAACCGAAGAGATAAGAAAATATGGAACAGCGAAGAACAATGTGCGAGTCTTCACTGTTCAAGAACTAGCCTATGCAACTGACAACTTTAGTCTTGACTTTTTGATCGGTGAAGGTGGCTTTGGCAGTGTCTATAAGGGATACTTACATAACATTGATCAAGCTGTGGCTGTGAAGCGACTGGACAGGAATAAATTGCAAGGAAGTAGAGAATTCTTTTCAGAAGTTATAACGTTGAGTTTGGTGAAGCATCCCAACCTTGTCAAGCTCATAGGTTATTGTGTTGAAGGAGATCAAAGGATGTTAGTTTATGAGTTGATGGTCAATGGCAGCCTTGAAAGTCACCTTCTAGATTTAGAAGATAAGGAGGGACTGGATTGGGAAACGAGGATGAAAATAGCAGTAGGAGCAGCAAGAGGAATGGAGTATCTGCATGAAGAAGCAGATCCACCCATTATATATAGAGACTTGAAGGCATCCAACATATTGTTAGATGAGAACTTCAATGCAAAGCTGTCAGATTTTGGGCTGGCCAAGATGGGACCCACAGAAGAAGGAAAGGACCATATCTCCACCAGGGTTATGGGCACTTTTGGGTACTGTTCTCCTGAGTATGCTTTGACCGGTCGCGTCACTACGAAATCTGATGTTTATAGTTTTGGAGTCGTGTTAATGGAGATCATCACTGGAAGAAGAGTCTATGATACTGCTAGAGCTGAAGAAGAGCAACACCTTATTGACTGGGCACAGCCACTGCTAGAGGACAGAGAGAAGTTCACACTAATGGCGGATCCATTGTTAAAGGGTAACTTCCCAGTGAAGGGACTGTTCAAAGCACTTGCAGTGGCAGCCATGTGTCTGCAAGCAGAAGCAGACACAAGACCTTTAATGAGTGATGTAGTATCAGCGCTTCAGCACATAACACTACCAAGAGTAAATGCTGAAGATATTGATGAAAATAACATCAGAGGAGAATCTATAAAATTTGCAGGCCATGTTGAATCATTTAGAATTGGAAGCTTACGTATAGACAGTAATCACAGGGCTGGAAGTTTTGGTCATCGTCAACAACATCTCAGGGCTGGAAGTTCAAGTTTAGGTCATAATCAACAACATACCAGGGCTGGAAGTTCAAGTTTAGGCCATCATCATCAGCATCACATGGATGGAAGTTCAAGTTTAGGCCATCATAAACATTACAGGGTTGGGAGTTCAAGTGTGTAG 1374 0.4221 MDCFPCCHKHELERAPMSRNSIDYAHSRKSTIKSFLGALSSKSGSRRQRQITEEIRKYGTAKNNVRVFTVQELAYATDNFSLDFLIGEGGFGSVYKGYLHNIDQAVAVKRLDRNKLQGSREFFSEVITLSLVKHPNLVKLIGYCVEGDQRMLVYELMVNGSLESHLLDLEDKEGLDWETRMKIAVGAARGMEYLHEEADPPIIYRDLKASNILLDENFNAKLSDFGLAKMGPTEEGKDHISTRVMGTFGYCSPEYALTGRVTTKSDVYSFGVVLMEIITGRRVYDTARAEEEQHLIDWAQPLLEDREKFTLMADPLLKGNFPVKGLFKALAVAAMCLQAEADTRPLMSDVVSALQHITLPRVNAEDIDENNIRGESIKFAGHVESFRIGSLRIDSNHRAGSFGHRQQHLRAGSSSLGHNQQHTRAGSSSLGHHHQHHMDGSSSLGHHKHYRVGSSSV 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0466 457 MobiDBLite consensus disorder prediction 397 457 - -
Mibi03g0466 457 SMART serkin_6 80 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0466 457 CDD STKc_IRAK 86 357 - -
Mibi03g0466 457 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524
Mibi03g0466 457 SUPERFAMILY Protein kinase-like (PK-like) 64 360 IPR011009 -
Mibi03g0466 457 PANTHER OS07G0668900 PROTEIN 3 363 - -
Mibi03g0466 457 FunFam Serine/threonine-protein kinase PBS1 157 372 - -
Mibi03g0466 457 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 53 156 - -
Mibi03g0466 457 MobiDBLite consensus disorder prediction 407 428 - -
Mibi03g0466 457 Gene3D Transferase(Phosphotransferase) domain 1 157 376 - -
Mibi03g0466 457 Pfam Protein tyrosine and serine/threonine kinase 85 295 IPR001245 GO:0004672|GO:0006468
Mibi03g0466 457 ProSiteProfiles Protein kinase domain profile. 80 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0466 457 Gene3D Phosphorylase Kinase; domain 1 40 156 - -
Mibi03g0466 457 MobiDBLite consensus disorder prediction 432 446 - -
Mibi03g0466 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0466 Mibi-ChrMibi03 6157397 6160550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0466 1 354 Glycoside Hydrolase AT3G07070 56.667 1.84e-138 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mibi03g0466 PK_Tyr_Ser-Thr 3.2e-47 CL0016