Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0451 ATGGAACGTGACGATGAATTGAGGGCTTCTTCTTCTTTTGGTGATGGTGATGATGACGTGGCGGTTCCACCACCTAGTACGGAAGAAATTGTGCAGATTTATCAGTTGTTGTTGTTGGACCTCACTTGTAACTTGAAGCCTGTCATTACTGATCTTACCATTATTGCTGAGCTTCAGGCTGAACATGCTAGAGGCATTGCTGATGCAATTTGCTCTCGGATTCTTGAGATTTTCTGTGAGGCATACAGGCAGGTTCATCCTAAGCTGCATAATGCTATGCGCCATCTCTTTGGCACCTGGTCAACAGTCTTTCCACCTTCTGTCTTACGCAAGATTGAAGTTCAACTGCAGTTTTCTCAGACAGTTAATGGTGGGTCATCCACCAATGATCCCCTTAGGGTGTCTGAATCTCGTCAACCAACTCATGGCATACATATCAATCCGAAGTACTTGCAGCAGTTGGAACACTCTACTATGGATAGTTTAGTAATGGAAGATAGTGCTAATGCGGACAAGTGCATAATGTATAACTGGCTTACAGCACCTGTGATTCTGAGATTGAATGAGTTGGAGGCTATGTTAGATCCAGACATATCGACAGTTGGAAGTGAAAAATTGGAGGCAACAGTAAATTTGGGTCTTGCAAATTTTGGCCGTGGCGCTAGTAAGATGCATCAATCTTTATCTAGTAGGCTTGGGAGATCTTCACCTTCAGGAATTGGACTTGATAGGCCTCCATCAGCAACTTTAGATGAGTGTGCAGTTAACAATTCTTCTAGCGGGATAGTTGAGAGAGATCTTCTCTCTCATCCTGCATTTGATTACGGAGTTGGTAAAGCAGGAAGTAGAGGTGAAGAGTTGAGTGGGTGGAAACAAAAACATTATTCTGGTGATGGTCAGAACCAGTTTCAAGTTTCTATGTCTAGTCTTAGTAATGGGCATCAGCGTCAAAATCTTAAAGCTTTAATAGATGCATATGGGAGCGATAAAAACAACCAAACTTTCGATCATAAGCCTTTGTTGGTTGAACATCAGGACATAACTGGTTTAAGCAAGGTCGCATCTACATCGTGGCAAGATACTGAAGAGGAGGAATTTGATTGGGAAGATATGAGTCCAACATTAGCAGACCATAATAGGAATAATGATTTCTTAACATCAAGGATCAGTCTCTCCAGGGAAAAGCATGTAGTCAGTGCAATTACTTCAGACCGGGATGCTGGGTGTAGTTGGCCTAGTCGGTCGCAGCTTCCACCAGTGGATGATTTCTCTGTTATAGCAGGAGATAAATTTTATGGACGAGGATCACCCATTCATGCATCTGGATACCAAAATCCAAGAAACCGAAGTTTAAGTTCCTGTCAACCTCTTGATGCTCGGATTATTAAAGGTCGAGCAAGCAATATTCAGATATCCTCTGTCAGTTACATTTCTAATAGTGATAAAAACCTTTATGGGATTCGGTCTGCTTCGTCCAGAATGGGTTCTGGGCTTGAGTCTCATGTGGAGATTCGTCCAACAGTTTTACCAGCATCTCTTGGCATTAGGCCCCCAGTTAATGTTCAAGCTGTTCGGCCCCCTACCTTAAATTATATTTTTCCCTTGGATAAATGTGCCAAGAGTCAGTTTGAGCCAATGCATCCTAGCAGCGCCATTGTAAATAATGGTCAAAATAATTCTTCATGTTTGGACCCTGTTGAGAACAAGGTTACAGGTTTATCAATGTTGCATCAGTTGCCAACCCAGCTAGCCGGGCAGATTTTATTTAACCAGAAAAATGTTGGACAAGCATCCCAAATTTTTCCATCTCAGGATGTGCAAGAGAAGTTACTTAGATCACAAGCTCCAGCAGCTTTGCAATTTAGTCGTGGAAGCTCTTTTCAAGGACATAATGATGCTATGACTAAAGCCATGCCAAATTCTCCCCCTGCTGTACAATTCCCTATCCCAGTCCAAAGCATTGCAAAAAACGCTTCTCAGTTACAAGGGGGAAACTTGATGTCTTTACCTCCAGCATCCCATCCTGCTATGTCAACCCAACAGCCAGGTGGTGCATTTTCTGGTTTAATTAATTCACTTATGGCCCAAGGCATGATATCATTGACTAATCAACCTCCTGAACAGGAGTCTGTTGGAACTGAGTTTAATCCAGATATTCTAAAGATTCGTCATGAGTCGGCAATCAGTGCCTTATATGGTAACCTTCCGAGACAATGCACTACTTGTGGCCGTCGATTCAAGTGCCAAGAGGAGCACAGTAGTCATATGGATTGGCATGTTACTAAGAACCGGATGTCTAAAAACCATAAGCAGAAGCACTCTCGCAAGTGGTTTGTGAATGAGAGTATGTGGCTTAGTGGTGCAGAGGCATTGGGCACAGAATCAGTCCCTGGTTTTTCACCAAGTGAGATTTTAGAGGAAACAAAAGATGATGAAGAGTTGGCTGTCCCGGCTGATGAGGACCGGAATACATGTGCATTATGTGGTGAGCCTTTCGATGAGTTTTACAGTGATGAAACTGAGGAATGGATGTACAGAGGAGCTGTTTATATCAATGCACCCAAGGGAACTGTAGCAGGCATGGATAGGTCGCAATTAGGCCCCATTGTTCATGCTAAGTGCAGATCTGAGTCTAGTGTGGTCCTATCTGAAGATAATCGACTGGATGAAAGGGCTGATGACTTTGAATCTGTAACTGATCTTGAATTAACACGTAGAGCCTCTTCAAAGAAGTGTATGACTCTTCTTGCTCGCTTTTGTGTTAATTCTTAA 2772 0.4282 MERDDELRASSSFGDGDDDVAVPPPSTEEIVQIYQLLLLDLTCNLKPVITDLTIIAELQAEHARGIADAICSRILEIFCEAYRQVHPKLHNAMRHLFGTWSTVFPPSVLRKIEVQLQFSQTVNGGSSTNDPLRVSESRQPTHGIHINPKYLQQLEHSTMDSLVMEDSANADKCIMYNWLTAPVILRLNELEAMLDPDISTVGSEKLEATVNLGLANFGRGASKMHQSLSSRLGRSSPSGIGLDRPPSATLDECAVNNSSSGIVERDLLSHPAFDYGVGKAGSRGEELSGWKQKHYSGDGQNQFQVSMSSLSNGHQRQNLKALIDAYGSDKNNQTFDHKPLLVEHQDITGLSKVASTSWQDTEEEEFDWEDMSPTLADHNRNNDFLTSRISLSREKHVVSAITSDRDAGCSWPSRSQLPPVDDFSVIAGDKFYGRGSPIHASGYQNPRNRSLSSCQPLDARIIKGRASNIQISSVSYISNSDKNLYGIRSASSRMGSGLESHVEIRPTVLPASLGIRPPVNVQAVRPPTLNYIFPLDKCAKSQFEPMHPSSAIVNNGQNNSSCLDPVENKVTGLSMLHQLPTQLAGQILFNQKNVGQASQIFPSQDVQEKLLRSQAPAALQFSRGSSFQGHNDAMTKAMPNSPPAVQFPIPVQSIAKNASQLQGGNLMSLPPASHPAMSTQQPGGAFSGLINSLMAQGMISLTNQPPEQESVGTEFNPDILKIRHESAISALYGNLPRQCTTCGRRFKCQEEHSSHMDWHVTKNRMSKNHKQKHSRKWFVNESMWLSGAEALGTESVPGFSPSEILEETKDDEELAVPADEDRNTCALCGEPFDEFYSDETEEWMYRGAVYINAPKGTVAGMDRSQLGPIVHAKCRSESSVVLSEDNRLDERADDFESVTDLELTRRASSKKCMTLLARFCVNS 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0451 923 SMART 558neu5 29 117 IPR006569 -
Mibi03g0451 923 ProSitePatterns Zinc finger C2H2 type domain signature. 739 759 IPR013087 -
Mibi03g0451 923 SUPERFAMILY ENTH/VHS domain 26 117 IPR008942 -
Mibi03g0451 923 MobiDBLite consensus disorder prediction 1 23 - -
Mibi03g0451 923 ProSiteProfiles Zinc finger C2H2 type domain profile. 737 764 IPR013087 -
Mibi03g0451 923 Gene3D - 75 117 IPR008942 -
Mibi03g0451 923 Gene3D - 23 74 IPR008942 -
Mibi03g0451 923 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 29 889 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0451 Mibi-ChrMibi03 5936714 5943723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0451 631 879 C2H2 Transcription Factor Family AT4G04885 63.158 2.05e-104 341