Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0449 ATGGCTGCCTCCCACCAATCTCTCCTTGACAAACCCAAAAAATCAATCTCCAAAACCATTTGGCTTCTTCTCTCTCTAGCTGCTCTCTTCAGCTCTGCTCTTACTGCTTCCTATCTCTTCTCACCCACCTCCTTCATCTTCAACCTCTCTCAATCTCACCATATCTGCAATCATGCCATCCACAAATCATCATGCCTATTCCATCTCAATGAACTACCCAAAGCTTCAATCTTTACTTCTAAAAACGAAGAATCATCATCATCCCACTTGCTTCAATCCTTCCTGATGAAAACTACCTCACAAATCCAGAAAACTATGGACTCAACCAAAGCCATCAAATACAGAATCAACAATCCAAAACAGAACCAAGCCCTGCTTGTCTGTGAAGAACTTCTTGACTTGTCCCTTAACAGAGTTTGGGATTCAATGGTGGCTTTCACAGAAAAAAACACCAAATCCTACCAAGATGCGCACACATGGCTCAGTACTGTGCTCACCAACCACATCACTTGCTTGGATGAGCTAGAAGGATCAGCTAGAGCCCTGATTGAAACAGAGCTCAATGACTTGGTCCTAAGAGCCAGAACCTCCCTAGCCATTCTGGTTCATATTATGCCCTCTCAAATTGATGCCATTGATGAGCCACTTCATGGTGAGTTTCCTTCATGGGTGACGGGTAAGGACAGGAAGCTTCTGGAATCTTCTGGTAATGATATAAAGGCCAATGTTGTGGTGGCCAAGGATGGAAGTGGAAAATTTAAGACAGTGAACGAGGCTGTAGCTTCAGCACCAGATAATAGTAAAACGAGGTATGTGATATATGTAAAGAAGGGAACTTATAAAGAGAATGTTGAGATTGGATCCAAGAAGAAGAATATAATGCTTGTGGGAGATGGTAAAGATGCGACAATTATCACTGGAAGTTTGAATTTTGTGGATGGAACACCAACCTTCAGAACTGCTACCGTTGCTGCGGTAGGAGATGGATTCATAGGACAAGACATATGGTTCCAAAACACTGCCGGACCTCAGAAACACCAGGCGGTGGCTCTCCGTGTCGGCGCCGATCTCTCCGTCATCAACCGCTGCCGTGTTGACGCATACCAAGACACACTCTACGCCCATTCCAACAGACAATTCTACCGTGACTCCATCATCACTGGCACTGTTGACTTTGTCTTTGGTAACGCCGCCGTGGTATTCCAAAAATGCTTCCTAGAGGCAAGAAGGCCAATGGAAAAACAGAACAATATGGTGACAGCACAAGGAAGAGAAGATCCAAACCAGAACACAGGAACTTCAATTCAGCTATGTAACTTAACACCAAGTTCTGACTTGAAGCCTGTGATAGGTTCAGTGAAAACATTTTTGGGTCGTCCATGGAAGGAGTATTCTAGAACTGTGGTGATGCAATCTTTTTTGAGTACACATATTGATCCAGCAGGGTGGGCTCCATGGGATGATAAGGAATCGACATTGAAGAATTTGTATTATGGAGAGTATATGAATAAAGGACCTGGTTCTGGTACTGCCAAGAGGGTGAAGTGGCCTGGGTATCATGTGATTAAAAGTGCTTCTGAGGCTAGTAAATTCACTGTGGCTCAGCTTATTCAAGGTGGAAGTTGGCTTAAGAACACTGGGGTGGCTTTCATTGAAGGGCTTTAA 1665 0.4408 MAASHQSLLDKPKKSISKTIWLLLSLAALFSSALTASYLFSPTSFIFNLSQSHHICNHAIHKSSCLFHLNELPKASIFTSKNEESSSSHLLQSFLMKTTSQIQKTMDSTKAIKYRINNPKQNQALLVCEELLDLSLNRVWDSMVAFTEKNTKSYQDAHTWLSTVLTNHITCLDELEGSARALIETELNDLVLRARTSLAILVHIMPSQIDAIDEPLHGEFPSWVTGKDRKLLESSGNDIKANVVVAKDGSGKFKTVNEAVASAPDNSKTRYVIYVKKGTYKENVEIGSKKKNIMLVGDGKDATIITGSLNFVDGTPTFRTATVAAVGDGFIGQDIWFQNTAGPQKHQAVALRVGADLSVINRCRVDAYQDTLYAHSNRQFYRDSIITGTVDFVFGNAAVVFQKCFLEARRPMEKQNNMVTAQGREDPNQNTGTSIQLCNLTPSSDLKPVIGSVKTFLGRPWKEYSRTVVMQSFLSTHIDPAGWAPWDDKESTLKNLYYGEYMNKGPGSGTAKRVKWPGYHVIKSASEASKFTVAQLIQGGSWLKNTGVAFIEGL 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0449 554 SUPERFAMILY Pectin lyase-like 240 553 IPR011050 -
Mibi03g0449 554 TIGRFAM PME_inhib: pectinesterase inhibitor domain 29 179 IPR006501 GO:0004857
Mibi03g0449 554 FunFam Pectinesterase 236 554 - -
Mibi03g0449 554 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 200 IPR035513 -
Mibi03g0449 554 ProSitePatterns Pectinesterase signature 2. 386 395 IPR033131 -
Mibi03g0449 554 PANTHER PECTINESTERASE 33 544 - -
Mibi03g0449 554 CDD PMEI-like_4 63 202 - -
Mibi03g0449 554 ProSitePatterns Pectinesterase signature 1. 267 286 IPR018040 -
Mibi03g0449 554 SMART PMEI_2 47 200 IPR006501 GO:0004857
Mibi03g0449 554 Gene3D - 236 554 IPR012334 -
Mibi03g0449 554 Pfam Pectinesterase 242 539 IPR000070 GO:0030599|GO:0042545
Mibi03g0449 554 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 204 IPR035513 -
Mibi03g0449 554 Pfam Plant invertase/pectin methylesterase inhibitor 53 189 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0449 Mibi-ChrMibi03 5895408 5897903 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0449 1 554 Carbohydrate Esterase AT1G11580 56.383 0.0 614