Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0448 ATGAATCCATCCACATTAACGTGTCCAGCTCTCTCTCTACCTGCTTATTATATTACTTCTGTGGGCTATGGATTCCAACCTGCTGGAGGAGATGGGTTCATAGGGCAAGACATATGGTTCCAAAACACTGCCGGACCTCAGAAGCACCAAGCGGTGGCTCTCCGAGTCAACGGCGATCTCTCCGTGGTCAACCGCTGCCGTATGGACGCATACCAAGACACACTATACACCCACAACAACAGGCAATTCTACCGTGACTGCTTCATCACCGGCACCGTCGATTTCATCTTCGGTAATGCTGCGGTCGTGTTCCAAAAGTGCAACCTAGTGGCCAGAAAGCCAGGGAACGGCCAAAACAACATGGTCACAGCACAAGGACGTGTAGATCCAAACCAAAACACAGGAACTTCAATCCAACAATGTAACATAATACCAAGTTCTGATCTCAAGCCAGTGGTGGGTTCAGTGAAGACATTCTTGGGTCGTCCATGGAAGGAATATTCTAGGACTATGGTAATGCAGTCATTTTTGGATAGCCATATTGATGCAGCAGGGTGGGCCCCATGGGACAATACGGAATCTACATTGAAGAATTTGTATTATGGAGAGTATATGAACAAAGGAGCTGGTGCTGGAACTGCAAAGAGAGTGAAGTGGCCTGGTTATCATGTGATTACAAGTGCGGCTGAGGCTAGCAAATTCACTGTGGCTCAGCTTATTCAAGGTGGGACTTGGTTGAAGAACACTGGGGTTGCCTTCATTGAAGGGCTTTAG 774 0.478 MNPSTLTCPALSLPAYYITSVGYGFQPAGGDGFIGQDIWFQNTAGPQKHQAVALRVNGDLSVVNRCRMDAYQDTLYTHNNRQFYRDCFITGTVDFIFGNAAVVFQKCNLVARKPGNGQNNMVTAQGRVDPNQNTGTSIQQCNIIPSSDLKPVVGSVKTFLGRPWKEYSRTMVMQSFLDSHIDAAGWAPWDNTESTLKNLYYGEYMNKGAGAGTAKRVKWPGYHVITSAAEASKFTVAQLIQGGTWLKNTGVAFIEGL 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0448 257 Pfam Pectinesterase 29 242 IPR000070 GO:0030599|GO:0042545
Mibi03g0448 257 SUPERFAMILY Pectin lyase-like 27 256 IPR011050 -
Mibi03g0448 257 Gene3D - 17 257 IPR012334 -
Mibi03g0448 257 ProSitePatterns Pectinesterase signature 2. 89 98 IPR033131 -
Mibi03g0448 257 FunFam Pectinesterase 4 17 257 - -
Mibi03g0448 257 PANTHER PECTINESTERASE 29 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0448 Mibi-ChrMibi03 5856862 5857896 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0448 28 257 Carbohydrate Esterase AT1G11580 71.304 2.48e-119 351