Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0447 ATGGCTTCTTCCCACCAGTCCCTCCTTGACAAACCCAAAAAATCAATTTCCAAAACCATTTGGCTTCTTCTCTCTCTAGCTGCTCTCATAGGTTTCTCAGCCCTTGTTGCTTCCAATCTCTTCACACCCTCCTCCTTCTTCAACCTCTCCCACAACCTGAGTAATCATAATCTTTGTGAACATGCCATTCACAAGTCATCATGCCATGCCCACATCTCTGAACTAACTCAAGCTTCAACCTTTACTACAGAATCCAACTTGCTTCAATCTTTCCTTATGAAAACCACCACACAAATCCAGAGAACTATGGACTCAACCAAAGCCATCAAATACAGAATCAACAACCCAAAACAGAACCAAGCCCTGCTTGTGTGTGAGGAACTTCTAGAAATGTCCCTTGAGAGAGTTTGGGACTCAATGGTGGCTCTCACAGAAAAGACCACCAAATCCTACCAAGATGCTCACACATGGCTCAGCACTGTGCTCACCAACCACATCACTTGTTTGGATGAGTTAGAAGGATCAGCCAAAACCCTGACTGAAACAGAGCTCAATGACTTAGTCTCAAGAGCCAGAACCTCCCTAGCCATTCTTGTTCATATTATGCCTTCTCAAAATAATTCCATTGATGAATCACTTTATGGGGAGTTCCCTTCATGGGTGACGGGTAAGGACAGGAAGCTTCTGGAATCTTCTGGTAATGATATAAAGGCCAACGTTGTGGTGGCTAAGGATGGAAGTGGGAGATTTAAGACAGTGAACGAGGCTGTAGCTTCAGCACCAGATAACAGTAAAACAAGGTATGTGATATATGTGAAGAAGGGAGTTTATAAGGAGAATGTTGAGATTGGATCCAAGAAGAAGAATATCATGCTGGTTGGTGATGGTATGGATGCCACTATCATCACGGGAAGCTTGAATGCCGTCGATGGAACACCCACCATCAGAACTGCCACTGTTTGTATGTATCCTAAAACCTTCTCTAGTTTTCCTCACTTCATCTCTTAA 1008 0.4355 MASSHQSLLDKPKKSISKTIWLLLSLAALIGFSALVASNLFTPSSFFNLSHNLSNHNLCEHAIHKSSCHAHISELTQASTFTTESNLLQSFLMKTTTQIQRTMDSTKAIKYRINNPKQNQALLVCEELLEMSLERVWDSMVALTEKTTKSYQDAHTWLSTVLTNHITCLDELEGSAKTLTETELNDLVSRARTSLAILVHIMPSQNNSIDESLYGEFPSWVTGKDRKLLESSGNDIKANVVVAKDGSGRFKTVNEAVASAPDNSKTRYVIYVKKGVYKENVEIGSKKKNIMLVGDGMDATIITGSLNAVDGTPTIRTATVCMYPKTFSSFPHFIS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0447 335 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 182 IPR035513 -
Mibi03g0447 335 SUPERFAMILY Pectin lyase-like 237 327 IPR011050 -
Mibi03g0447 335 CDD PMEI-like_4 66 199 - -
Mibi03g0447 335 ProSitePatterns Pectinesterase signature 1. 264 283 IPR018040 -
Mibi03g0447 335 Pfam Pectinesterase 239 327 IPR000070 GO:0030599|GO:0042545
Mibi03g0447 335 TIGRFAM PME_inhib: pectinesterase inhibitor domain 32 177 IPR006501 GO:0004857
Mibi03g0447 335 Pfam Plant invertase/pectin methylesterase inhibitor 56 189 IPR006501 GO:0004857
Mibi03g0447 335 Gene3D - 233 329 IPR012334 -
Mibi03g0447 335 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 202 IPR035513 -
Mibi03g0447 335 PANTHER PECTINESTERASE 30 323 - -
Mibi03g0447 335 SMART PMEI_2 50 197 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0447 Mibi-ChrMibi03 5849466 5850473 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0447 1 320 Carbohydrate Esterase AT1G11580 46.037 1.20e-87 272