Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0445 ATGGCTTCTTCTTCCCATCAATCCCTCCTTGACAAACCCAAAAACACCACTTCCAAAACCATATGGCTTCTTCTCTCTCTAGCTGCTCTAATAGGTTTATCAGCCCTTGTTTCTTCTAATCTCTTCACATCATCCTCCTCCTCCTTCATCAACCTCTCTCACCCTTATCATAATCTCTGTGAACATGCCGTTCACAAATCATCATGCCTTGCCCACATCTCTGAACTAACTCAAGGTTCAACCTACTCTACAAAATTCCACCCTCTTCAATCCTTCCTCATGAAAACCACCACACAAATCCAGAAAACTATGGACTCAACCAAAGCCATCAAATATAGAATCAACAATCCAAAACAGAACCAAGCCCTGCTTGTGTGTGAGGAACTTCTAGAAATGTCCCTTGGGAGAGTTTGGAACTCAACGGAAGCTCTCTCCGAGAAGACCACCAAATCCTACCAAGATGCTCACACATGGCTCAGCACTGTGCTCACCAACCACATCACTTGTTTGGATGAGTTAGAAGGATCAGCTAGAGCCCTTATAGAATCTGAGCTCAATGACTTAGTCTCAAGAGCCAGAACCTCCCTAGCCATTCTTGTTCATATTATGCCCTCTCAAGTTGATGCTATTCATGAGGAGCCTCTTAATGGTAAGTTTCCCTCATGGGTGACTGGTAAGGATAGGAAGCTTCTAGAAGCTTCTGGTAATGATATAAAGGCCAACGTTGTAGTGGCCCAGGATGGAAGTGGGAAGTTTAAGACTGTGAAGGAGGCTGTGGCTTCGGCACCAGATAATGGTAAGACAAGGTATGTGATATATGTGAAGAAGGGAACTTATAAGGAAAATGTTGAGATTGGATCAACGAAGAAGAATATAATGCTGGTCGGTGATGGTATGGATGCCACTATCATTACTGGAAGCTTGAATTTTGTCGATGGAACTCCCACGTTCAAAACTGCCACCGTCGCTGCGGTAGGGGATGGATTCATAGGGCAAGACATATGGTTCCAAAACACCGCCGGACCTCAGAAACACCAGGCGGTGGCTCTCCGTGTCGGCGCCGATCTTTCAGTCATAAACCGCTGCCGTGTTGACGCATACCAAGACACACTTTACGCCCACACCAACAGACAATTCTACCGTGACTCCGTCATCACTGGCACCGTTGACTTTGTCTTCGGTAACGCTGCCGTGGTATTCCAAAAGTGCAACCTCATTGCCAGAAAGCCAATGGCCAATCAGAACAACATGGTGACAGCACAAGGAAGAGAAGATCCAAACCAAAACACGGGAACTTCAATCCAACAATGTAACTTAACACCAAGTTCTGATTTAAAGCCTGTGGTGGGTACATTTAAGACATTTTTGGGTCGTCCATGGAAGGAATATTCCAGGACTGTTGTGATGCAGTCCTTTTTGGATAGCCATATTGATCCTACAGGGTGGGCCCCATGGGATGATAAGCAATCGACATTGAAGAATTTGTATTATGGAGAGTATATGAATAATGGGCCTGGTTCTGGTGTTGCCAAGAGAGTGAATTGGGGTGGTTATCATGTGATTACAAGTGTGGCTGAGGCTAGTAAATTCACTGTGGCTCAGCTTATTCAAGGTGGGACTTGGTTGAAGAACACTGGGGTGGCTTTTATTGAAGGGCTTTAG 1662 0.4531 MASSSHQSLLDKPKNTTSKTIWLLLSLAALIGLSALVSSNLFTSSSSSFINLSHPYHNLCEHAVHKSSCLAHISELTQGSTYSTKFHPLQSFLMKTTTQIQKTMDSTKAIKYRINNPKQNQALLVCEELLEMSLGRVWNSTEALSEKTTKSYQDAHTWLSTVLTNHITCLDELEGSARALIESELNDLVSRARTSLAILVHIMPSQVDAIHEEPLNGKFPSWVTGKDRKLLEASGNDIKANVVVAQDGSGKFKTVKEAVASAPDNGKTRYVIYVKKGTYKENVEIGSTKKNIMLVGDGMDATIITGSLNFVDGTPTFKTATVAAVGDGFIGQDIWFQNTAGPQKHQAVALRVGADLSVINRCRVDAYQDTLYAHTNRQFYRDSVITGTVDFVFGNAAVVFQKCNLIARKPMANQNNMVTAQGREDPNQNTGTSIQQCNLTPSSDLKPVVGTFKTFLGRPWKEYSRTVVMQSFLDSHIDPTGWAPWDDKQSTLKNLYYGEYMNNGPGSGVAKRVNWGGYHVITSVAEASKFTVAQLIQGGTWLKNTGVAFIEGL 553
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0445 553 Pfam Pectinesterase 241 538 IPR000070 GO:0030599|GO:0042545
Mibi03g0445 553 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 198 IPR035513 -
Mibi03g0445 553 PANTHER PECTINESTERASE 37 543 - -
Mibi03g0445 553 TIGRFAM PME_inhib: pectinesterase inhibitor domain 36 178 IPR006501 GO:0004857
Mibi03g0445 553 SUPERFAMILY Pectin lyase-like 239 552 IPR011050 -
Mibi03g0445 553 ProSitePatterns Pectinesterase signature 1. 266 285 IPR018040 -
Mibi03g0445 553 Gene3D - 235 553 IPR012334 -
Mibi03g0445 553 Pfam Plant invertase/pectin methylesterase inhibitor 57 190 IPR006501 GO:0004857
Mibi03g0445 553 FunFam Pectinesterase 235 553 - -
Mibi03g0445 553 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Mibi03g0445 553 Gene3D Invertase/pectin methylesterase inhibitor family protein 57 203 IPR035513 -
Mibi03g0445 553 SMART PMEI_2 51 198 IPR006501 GO:0004857
Mibi03g0445 553 CDD PMEI-like_4 67 200 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi03g0445 Mibi-ChrMibi03 5810591 5812948 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0445 3 553 Carbohydrate Esterase AT1G11580 54.919 0.0 617