Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0438 ATGGCTGCTTCAGGACATTCTTCCACTGATGAAGTCTTGGAGAATCTTCAAGAGGAGACCAGTAAAGAATCAAAGCTAGAATTTTCCAGCGATGAGGAAGAATTGATTATCAGAATGTATAATCTTGTTGGTGAAAGATGGGATTTAATAGCTGGGAGGATCCCTGGAAGAACAGCTGAAGAAATCGAAGAGTACTGGACTGCTACACACTCAACAAGTGAATGA 225 0.4089 MAASGHSSTDEVLENLQEETSKESKLEFSSDEEELIIRMYNLVGERWDLIAGRIPGRTAEEIEEYWTATHSTSE 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0438 74 ProSiteProfiles Myb-like domain profile. 20 70 IPR001005 -
Mibi03g0438 74 MobiDBLite consensus disorder prediction 1 28 - -
Mibi03g0438 74 FunFam MYB-like transcription factor 27 69 - -
Mibi03g0438 74 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 74 IPR017930 -
Mibi03g0438 74 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 27 69 - -
Mibi03g0438 74 Gene3D - 27 69 - -
Mibi03g0438 74 MobiDBLite consensus disorder prediction 12 28 - -
Mibi03g0438 74 CDD SANT 27 66 IPR001005 -
Mibi03g0438 74 Pfam Myb-like DNA-binding domain 27 66 IPR001005 -
Mibi03g0438 74 SUPERFAMILY Homeodomain-like 27 69 IPR009057 -
Mibi03g0438 74 SMART sant 24 72 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0438 Mibi-ChrMibi03 5764742 5765241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0438 29 68 MYB Transcription Factor Family AT5G35550 67.500 9.91e-15 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi03g0438 Myb_DNA-binding 2.6e-09 CL0123