Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0425 ATGATCATCAAAAAATTAATGATTCGCTTCATGAATTCTCTCACACCCTTTGTGCCCCTTTGTCTTGTAATCTTTTTGTTGCCTAGAATCAAAGCACAACAGCATTGTTCAGGCCCAACTTATTCTCCCAACAGCACATACCACACCAATCTTAATCTCTTACTCTCTTCCCTTTCCTCAAACGCCAATCAAAGCGATGGATTTTACAATACCACCGTCGGACAACACATCGACACCGTCTATGGCCTCTTCCTCTGCCGTGGAGACGCCACTATTCCGGATTGTCAAGAATGTGTTTCCAGCGCAATCAAAGATATAACAACCTCTAAAAATTGCCCCAATACTACACAAGCTGTGGGTTGGTATGACAAATGCATGATAAGATACTCAGACACATATTTCTTCTCCATAGAGCAAGATAATCCCACGGGCATCGCGTACAACATAGCCAATGCAACAAAACCAACCAGCTTTATGAAACTGGTGGTTGATACCTTGAATGAGGTGGCGCAACAAGCGGCGTACGGTGGTGGCAGCAAGAAATTTTTTGCGACCAAAGATGCAAAGTTTAGCGATTTTGAAACAATTTATTCTATGGGGCAGTGCACGCCAGATATAACTGGAGGTGAATGTTATAACTGTTTGAGAAAAACAAGTGCAGAGTACCCAAGTTGCTGTTTTGGGAAGGTAGGGGGAGTAGTACGTGCCCCTAGTTGCAATGTAAGGTATGAAGTATACCCCTTTTATGGAGTGACTCCCCCGCCACCATCTCCACCGCCACCGGCAAAAACCCCTTCCGATGATAAAAGCAAGATTTCAGGTAAGGGAAAGATCACATCAGCTGGGACAATTATGGCCATAGTTGTTCCAACAGTGATTTTCATATTGATTGTCTCCCTCTGCTTCTTTTGCCTGTTGAAAAGGAGAGCAATGAAGAAGGATTCCTCATTCGACAAACAAAGCGATGTTGACATTTCAAGTGTGCAATCTCTGCAATTTGATTTGGATGCCATCAAATCAGCCACAAACAACTTCTCTCCTGACAATAAACTAGGTCAAGGAGGATTTGGTGAAGTATATAAGGGTATCCTACCTGGTGGACAAGAGTTAGCTGTGAAGAGGTTGTCAAGTAGCTCCAAACAAGGTGTAGAACAATTTAAAAATGAAGTTGTTACTATGGCAAAGCTTCAACATCGAAATCTTGTAAGGTTACTAGGATTCTGCTTGGATGAGGAAGAAAAGATACTCATATATGAATTTTTGCCCAAGAAAAGCCTGGATAAATTTCTATTTGAACCTGAGAATAAAGGTGAATTGAATTGGTCAAAGCGTTACAAGATTATTGAAGGCATTACAAGGGGGATGCTTTATCTTCATGAAGATTCTCGACTAAAAATTATACACCGTGATCTCAAAGCAAGTAATGTATTGTTAGATGAAAATTTAAATCCAAAAATTTCTGATTTTGGTATGGCTAGAATTTTTGGAGTTGATCAATCTCAAGCAGACACAAGTAGAGTTGTGGGTACATATGGTTATATGGCACCTGAATATGCTATGCATGGTCAGATTTCAGTCAAATCTGATATATATAGTTTTGGTGTCTTAATCTTAGAGATTATTACCGGCCAAAAGAATACATCCTTCTATATATCAAGTAGTGCTGAAGACTTATTGAGCTATGCTTGGAAGCTGTGGAGCAAAGGGACACCATTAGAATTGCTGGATCCTAATCTAAGGGATTCTTATTCAAGAAACGAAGTTATTAAATGCATTCATATAAGCTTGTTGTGTGTTCAGGAAAGCCAGGCTCTGAGACCTACAATACAATCCATTTTGGTGATGTTAGGTAGTGACTCTGTCACCCTACCAGCCCCTCATGAGCCAGCATTTTTTGTTGATCGTAGTGGAACAGATTCAAACAAGGCCGCCATTACTATTGATGGAAATAAGTCTGATCAGTCTACAAGCGGCTCGGTGCAGTGGTCTGTGGATAAGGATCCGATCACTGACTTGTACCCTCGCTAG 2028 0.4088 MIIKKLMIRFMNSLTPFVPLCLVIFLLPRIKAQQHCSGPTYSPNSTYHTNLNLLLSSLSSNANQSDGFYNTTVGQHIDTVYGLFLCRGDATIPDCQECVSSAIKDITTSKNCPNTTQAVGWYDKCMIRYSDTYFFSIEQDNPTGIAYNIANATKPTSFMKLVVDTLNEVAQQAAYGGGSKKFFATKDAKFSDFETIYSMGQCTPDITGGECYNCLRKTSAEYPSCCFGKVGGVVRAPSCNVRYEVYPFYGVTPPPPSPPPPAKTPSDDKSKISGKGKITSAGTIMAIVVPTVIFILIVSLCFFCLLKRRAMKKDSSFDKQSDVDISSVQSLQFDLDAIKSATNNFSPDNKLGQGGFGEVYKGILPGGQELAVKRLSSSSKQGVEQFKNEVVTMAKLQHRNLVRLLGFCLDEEEKILIYEFLPKKSLDKFLFEPENKGELNWSKRYKIIEGITRGMLYLHEDSRLKIIHRDLKASNVLLDENLNPKISDFGMARIFGVDQSQADTSRVVGTYGYMAPEYAMHGQISVKSDIYSFGVLILEIITGQKNTSFYISSSAEDLLSYAWKLWSKGTPLELLDPNLRDSYSRNEVIKCIHISLLCVQESQALRPTIQSILVMLGSDSVTLPAPHEPAFFVDRSGTDSNKAAITIDGNKSDQSTSGSVQWSVDKDPITDLYPR 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0425 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Mibi03g0425 675 Gene3D Transferase(Phosphotransferase) domain 1 421 622 - -
Mibi03g0425 675 ProSiteProfiles Gnk2-homologous domain profile. 140 248 IPR002902 -
Mibi03g0425 675 MobiDBLite consensus disorder prediction 254 273 - -
Mibi03g0425 675 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Mibi03g0425 675 CDD STKc_IRAK 351 616 - -
Mibi03g0425 675 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 660 - -
Mibi03g0425 675 FunFam Cysteine-rich receptor-like protein kinase 10 143 248 - -
Mibi03g0425 675 Pfam Protein tyrosine and serine/threonine kinase 348 613 IPR001245 GO:0004672|GO:0006468
Mibi03g0425 675 Gene3D - 30 134 IPR038408 -
Mibi03g0425 675 Gene3D - 143 248 IPR038408 -
Mibi03g0425 675 FunFam Cysteine-rich receptor-like protein kinase 10 307 420 - -
Mibi03g0425 675 Pfam Salt stress response/antifungal 151 245 IPR002902 -
Mibi03g0425 675 Pfam Salt stress response/antifungal 36 131 IPR002902 -
Mibi03g0425 675 FunFam cysteine-rich receptor-like protein kinase 10 421 623 - -
Mibi03g0425 675 ProSiteProfiles Protein kinase domain profile. 345 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0425 675 Gene3D Phosphorylase Kinase; domain 1 306 420 - -
Mibi03g0425 675 SMART serkin_6 345 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0425 675 SUPERFAMILY Protein kinase-like (PK-like) 331 633 IPR011009 -
Mibi03g0425 675 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 29 134 - -
Mibi03g0425 675 ProSiteProfiles Gnk2-homologous domain profile. 29 134 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0425 Mibi-ChrMibi03 5565006 5568541 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0425 40 675 Receptor kinase-like Gene Family AT4G05200 50.998 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g0425 PK_Tyr_Ser-Thr 4.3e-48 CL0016