Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0423 ATGAGTCGACAGACTCAATACAATCCGTGCCCCCGGCGTATAATGAAACGAATTAATCATCACAGAATGTTTGGCTTCACGACATCTCCAAAACTCTTTCTTCTTCTTTGCCTTATAATCCCTTTGGTTGTTAGAATCCGAGGAGAAACCTACAGTTGTTCACCTAACACTTATACCCAAAACAGCACATTTCACACAAATGTCCGTCTCTTACTTTCTTCCCTTTCTTCCAACGCCAATCAAAGTGATGATGGGTTTTACAACACCACCGTCGGAGGGCAAGAAAACAACCCAAACACCACCGTCTACGGCCTCTTCCAGTGTTTCGGTGATACCAACGTTCAAGGATGTCAAAAATGTGTTTCCGTTGGAGCCAATCATCTCCTTGAGAAATGTCCCAATACTACAGGAGCCGTCGGTTGGTATGACAAGTGCTGGTTACATTTTTCCGGCGACGAGTATATCTTCTCCAAAATGCAAGAAGAGCCCCAGCAAATTTTTTATAACGTCGACAATGCAACAGACACGAATAGCTTTATGAACTTGTTGGGTGAAACGTGGAGAGTGGTTACGAAAGAGGCATCACAAGGCGGAAGGAAGAAATATGCAACGAAAGAAGTAAACTATAGTTCTTTCCAAACTATATATACAATGGCACAGTGCACGCAGGATATAAATGAGATTGATTGTCTCAACTGTCTTGGTAATAGTATTAGCTATTGGCCTATTTGCTGTAATGGAAGAGTGGGGGGAGTAACCGTCAAGCCCAGTTGCTATTTAAGGTATGAAACGTACGCCTTTTATCAGGATGTGCCTCCGCCGCCGTCAGCTACTCCGCCACCAAATCCTTCACCGGAATCCACATCCAAAGGTAAAGGAAGGATTTCAGCTGGGATAATTGTTGCCATAGCTGTTCCCACAGTGGTATTCATATTGCTAGTCTCGCTCTGCTTCTTGTGGTTAAAAAGGAGAGGAAGGAAATATAATCCAGTTCCTGAACAAACTGTTGACATTTCCAGCGCGGAGTCCTTACAGTTTAATTTGGATACCATCAAATCAGCCACAAACGACTTCTCTCCTGACAATAAACTTGGTCAGGGAGGATTTGGTGAAGTATACAAGGGTATTCTACCTGGTGGACAAGAGTTAGCCGTGAAAAGACTATCAAGCAGCTCAAAACAAGGCATAGGAGAATTTAAGAATGAAGTTCTTACGATGGCAAAACTTCAACACAGAAATCTTGTAAGGTTACTTGGATTTTGCTTGGATGAAGGAGAAAATATACTCATATATGAATTCCTCCCCAACAAAAGCTTGGATAATTTCTTGTTCGGACTTGAAAATCAAGGTAAGTTGAATTGGTCACATCGTTACAAGATTATTGAAGGCATTGCAAGGGGAATGCTCTACCTTCATGAAGATTCTCGACTCAAAATTATACACCGCGATCTAAAAGCTAGTAATGTATTGTTGGATAAAGATTTGAATCCAAAAATATCTGATTTTGGTATGGCTAGAATTTTTGGAGTTGATCAAACACAAGCAAGCACAAGCAGAGTTGTTGGAACATTACCTACTAAGCTATGCCTGGAAGCTGTGGAGGGGAGGGACGCCATTGGAATTGCTGGATCCAACTTTAAGAGATTTTTGTTCAAGAAATGA 1662 0.4164 MSRQTQYNPCPRRIMKRINHHRMFGFTTSPKLFLLLCLIIPLVVRIRGETYSCSPNTYTQNSTFHTNVRLLLSSLSSNANQSDDGFYNTTVGGQENNPNTTVYGLFQCFGDTNVQGCQKCVSVGANHLLEKCPNTTGAVGWYDKCWLHFSGDEYIFSKMQEEPQQIFYNVDNATDTNSFMNLLGETWRVVTKEASQGGRKKYATKEVNYSSFQTIYTMAQCTQDINEIDCLNCLGNSISYWPICCNGRVGGVTVKPSCYLRYETYAFYQDVPPPPSATPPPNPSPESTSKGKGRISAGIIVAIAVPTVVFILLVSLCFLWLKRRGRKYNPVPEQTVDISSAESLQFNLDTIKSATNDFSPDNKLGQGGFGEVYKGILPGGQELAVKRLSSSSKQGIGEFKNEVLTMAKLQHRNLVRLLGFCLDEGENILIYEFLPNKSLDNFLFGLENQGKLNWSHRYKIIEGIARGMLYLHEDSRLKIIHRDLKASNVLLDKDLNPKISDFGMARIFGVDQTQASTSRVVGTLPTKLCLEAVEGRDAIGIAGSNFKRFLFKK 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0423 553 Gene3D Phosphorylase Kinase; domain 1 322 433 - -
Mibi03g0423 553 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524
Mibi03g0423 553 Pfam Salt stress response/antifungal 172 265 IPR002902 -
Mibi03g0423 553 Pfam Salt stress response/antifungal 53 150 IPR002902 -
Mibi03g0423 553 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 434 525 - -
Mibi03g0423 553 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 55 524 - -
Mibi03g0423 553 MobiDBLite consensus disorder prediction 271 290 - -
Mibi03g0423 553 ProSiteProfiles Gnk2-homologous domain profile. 46 154 IPR002902 -
Mibi03g0423 553 ProSiteProfiles Gnk2-homologous domain profile. 161 267 IPR002902 -
Mibi03g0423 553 SUPERFAMILY Protein kinase-like (PK-like) 337 524 IPR011009 -
Mibi03g0423 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Mibi03g0423 553 Gene3D Transferase(Phosphotransferase) domain 1 434 527 - -
Mibi03g0423 553 FunFam Cysteine-rich receptor-like protein kinase 25 163 267 - -
Mibi03g0423 553 FunFam Cysteine-rich receptor-like protein kinase 10 322 433 - -
Mibi03g0423 553 MobiDBLite consensus disorder prediction 272 286 - -
Mibi03g0423 553 ProSiteProfiles Protein kinase domain profile. 358 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0423 553 SMART serkin_6 358 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0423 553 Pfam Protein tyrosine and serine/threonine kinase 361 525 IPR001245 GO:0004672|GO:0006468
Mibi03g0423 553 Gene3D - 48 154 IPR038408 -
Mibi03g0423 553 Gene3D - 163 267 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0423 Mibi-ChrMibi03 5498307 5501737 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0423 26 523 Receptor kinase-like Gene Family AT4G05200 48.638 4.77e-153 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g0423 PK_Tyr_Ser-Thr 3.7e-34 CL0016