Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0422 ATGAGAAGGGGTATAGGGTACTCGATTGGACCCAGCAAACAGCTGGTCGTACAGCATTACCATGTCCCTATAACTCCCAAGTGTGAAACAGCACATTCGAACACCACAAAATTAATGATTCTCTTCATGTATTCTACCAAGAACTTCCTTCTCTTTGGTCTCATAATCTGCTTGATTCCTAGAATCAAAGCTCAGATGCCACAACTTTTTTGTTCAGGCCCAACTTATGCTCCAAACAGCACTTACAATACAAACCTTAATAGCTTACTCTCAACCCTTACCTCAAACGCCAATCGTAGTGATGGCTTTTACTACACCACCGTGGGAAAAAACAGCGCTGCCGCCTATGGCCTCTTCCTCTGCCGCGGTGACATCACTGTTCCTGCATGTGAAGTATGTGTTTCCCAAGCAACCAAACTTACCACGCAATGCATCAATACTACACAAGCCGTGAGCTGGTCAGACAAGTGCACGTTACGTTACTCAGATGCCGATTTCTACTCCATAGAGCAAGATGATCCCACACGCTTCATGTACAACAATGCCAATGCAACAGATCCATCGAGCTTTATGCAACTGGTGCTTGAGACGATGAAGGAGGTGGCGAATGAGGCGGCTTATGGGGGCAAAGGTAGCCGCAAATTCGCGACAAAAGAAGAGAACTACAGTGCTTTTCAAACTCTATATACTATGGCACAGTGCACGCCGGATTTGTCTGGAGAGGAATGTTATAATTGTTTGAGTAGAGTAATTGGTGAGTACCCTAATTGTTGTTTTGGGAGAGTTGGGGCGATTGCACGCGCCTTCAGTTGTAATGTAAGGTATGAATTGTATCCCTTTTATGGAGTGGTTTCGTTGCTGCCTTCTCATCATCCGCCATCACAACTAGAGTCCACTTCCAAAGGTAAAAGCAAGATTTCGGTTGTGATAATTATTGCCATAGCAGTTCAATCAGCGATACTCATATTGCAAGTCTCGCTCTGCTTCTTGTGCCTGAAGTGGAGAGCAAGGATGAATGATTCACTTCCTAAAAATGTTGAGGTTGCAAGTGTAGAGTCTCTTCATTTTGATTTTAATGACATCAAATCAGCCACAAATAATTTCTCCCCTGAAAATAAACTAGGCCAAGGTGGATATGGTGAGGTGTACAGGGGTATTTTACCTAATGGACAAGAGTTAGCTGTGAAGAGGCTATCAAATAGTTCCAAACAAGGTGTACCCGAGTTTAAGAATGAAGTAGTTACAATGGCAAAACTTCAACATAGAAATCTTGTACGATTTCTAGGATTTTGTTTGGAGGAAGAAGAAAAGATACTTGTGTATGAATATTTGCCCAACAAAAGCTTAGATAATTTTTTGTTTGGACTTGAGAACAATGTTAAACTACATTGGCCAGAACGAATCAAGATTATTGAAGGCATTGCAAGGGGGATAACTTACCTTCATGAAGATTCTCAACTCAAAATCATACATCGTGATCTCAAATCTAGCAATGTATTGTTGGATGAAGATCTGAATCCGAAAATTTCTGATTTTGGTATGGCTAGAATTTTTGGAGCCGATCAAACTCAAGCTAATACGAGTAAAGTTGTCGGCACATTTGGCTACATGTCTCCTGAATATGCAATGCATGGTCATATTTCAGTCAAAACTGATATTTACAGCTTTGGTGTCCTACTCCTGGAGATCATTAGTGGCAAGAAGAATACATCTTTCCATGCATCAAATTATGCTGAAAACTTGCTTACATATGCCTGGAAACTCTGGAGGGAAGGGGCGCCATTAGAATTGCTGGATCCTGGTCTAAGAAATTCTTGTCCAGGAAATGAAGTTGTTAAATGCATTCACATAAGCTTGTTGTGTATCCAGGAAAATCCAGCTCTAAGACCCACAATTCAATCTATTATGGTGATGCTAAGTAGTCACACCATCTCGATGCCAGTTCCTCAACAGCCTGCATTTTTATTTGATCGCCAAAGAACAGATTTAAACAATGGAGCAATTTCTGAGAATAGCTCCGATCAATCTACAAGCAGGTCTATGCAACAGTCTGTGAATCAAGATCCAATTTCTGACTTGCACCCTCGTTAG 2091 0.4142 MRRGIGYSIGPSKQLVVQHYHVPITPKCETAHSNTTKLMILFMYSTKNFLLFGLIICLIPRIKAQMPQLFCSGPTYAPNSTYNTNLNSLLSTLTSNANRSDGFYYTTVGKNSAAAYGLFLCRGDITVPACEVCVSQATKLTTQCINTTQAVSWSDKCTLRYSDADFYSIEQDDPTRFMYNNANATDPSSFMQLVLETMKEVANEAAYGGKGSRKFATKEENYSAFQTLYTMAQCTPDLSGEECYNCLSRVIGEYPNCCFGRVGAIARAFSCNVRYELYPFYGVVSLLPSHHPPSQLESTSKGKSKISVVIIIAIAVQSAILILQVSLCFLCLKWRARMNDSLPKNVEVASVESLHFDFNDIKSATNNFSPENKLGQGGYGEVYRGILPNGQELAVKRLSNSSKQGVPEFKNEVVTMAKLQHRNLVRFLGFCLEEEEKILVYEYLPNKSLDNFLFGLENNVKLHWPERIKIIEGIARGITYLHEDSQLKIIHRDLKSSNVLLDEDLNPKISDFGMARIFGADQTQANTSKVVGTFGYMSPEYAMHGHISVKTDIYSFGVLLLEIISGKKNTSFHASNYAENLLTYAWKLWREGAPLELLDPGLRNSCPGNEVVKCIHISLLCIQENPALRPTIQSIMVMLSSHTISMPVPQQPAFLFDRQRTDLNNGAISENSSDQSTSRSMQQSVNQDPISDLHPR 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0422 696 FunFam cysteine-rich receptor-like protein kinase 10 444 646 - -
Mibi03g0422 696 ProSiteProfiles Gnk2-homologous domain profile. 172 280 IPR002902 -
Mibi03g0422 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Mibi03g0422 696 MobiDBLite consensus disorder prediction 665 696 - -
Mibi03g0422 696 SMART serkin_6 368 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0422 696 Gene3D Phosphorylase Kinase; domain 1 330 443 - -
Mibi03g0422 696 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 72 691 - -
Mibi03g0422 696 Pfam Protein tyrosine and serine/threonine kinase 371 638 IPR001245 GO:0004672|GO:0006468
Mibi03g0422 696 ProSiteProfiles Gnk2-homologous domain profile. 64 166 IPR002902 -
Mibi03g0422 696 ProSiteProfiles Protein kinase domain profile. 368 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0422 696 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 64 166 - -
Mibi03g0422 696 CDD STKc_IRAK 374 639 - -
Mibi03g0422 696 Gene3D - 174 280 IPR038408 -
Mibi03g0422 696 Gene3D - 64 166 IPR038408 -
Mibi03g0422 696 SUPERFAMILY Protein kinase-like (PK-like) 353 664 IPR011009 -
Mibi03g0422 696 Pfam Salt stress response/antifungal 71 163 IPR002902 -
Mibi03g0422 696 Pfam Salt stress response/antifungal 182 278 IPR002902 -
Mibi03g0422 696 MobiDBLite consensus disorder prediction 665 690 - -
Mibi03g0422 696 FunFam Cysteine-rich receptor-like protein kinase 10 174 280 - -
Mibi03g0422 696 Gene3D Transferase(Phosphotransferase) domain 1 444 648 - -
Mibi03g0422 696 FunFam Cysteine-rich receptor-like protein kinase 10 333 443 - -
Mibi03g0422 696 ProSitePatterns Protein kinases ATP-binding region signature. 374 396 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0422 Mibi-ChrMibi03 5437999 5444354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0422 75 696 Receptor kinase-like Gene Family AT4G05200 48.217 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g0422 PK_Tyr_Ser-Thr 1.7e-48 CL0016