Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0420 ATGTTCCTCATTAACATGCCTTCCCACAAAATTATCTTACTCTTTTTCTTTACGAGCTTTCTCTATTTTTCTAATACTCAAGCACAACCCACTTATACTAATAGCAGCTGTTCTCCCAACAACTTCACCGCCAATAGTTCATTCCAATCTTCCCTTACCACCCTCCTCTCTTCCTTAGCTTCCAACAAGACCAACAACACCGACTTCTTCAACACCACCGTCCACGGTGGCGGTGGCAACACCGTGTACGGCCTATTCATGTGCCGGGGTGACGTCAATCTCACGACTTGCCACCAGTGCGTCATTGACGCAACCACCAGGATACGTTCCCTATGCAACTTCTCAAAAGAGGCCGTGATCTGGTACGAGGAGTGCATGCTGCGCTACTCCGACCAGTACTTTTTTTCCTCCGTCGACACGAGTCCTAATCGGTGTGGGGCCAACTCTAACAACGTCGCCAACAACCAAACCGGATTCATGAACTTATTGTCCACAACTATGAACACGGCAGCCGATGAGGCAGCGAAGCCTGCTTCGGGGCTTAAGAAGTTTGCAACACAAGAAGCTAGTTTACAGTTTCAAACTATGTATTGTCTTGTTCAATGCACGCCTGACCTTTCGCCGGAAGGTTGTAGAACATGCCTGAAAAGTGCGATTGATGAGCTTTTCAAATGTAGTGACAATAGTATAGGTGGAAGGGTTCTATATCCAAGTTGTAACGTTCGTTATGAATTGTTCATCTTTTACAATTCTAGTGGTCAACCAAGATCTCCGCCTCCTCCTGCAATTTTTCAGGCAGTTAATCAAGGAAATACAAGGACCGTTGTGATAGTTGTGGTTTCTGTTGGAAGTGCGGCGATACTTTTTTGTTTGGTTTACTATATCTTGTGGAATCTCGTAAAGAAGAGACGCCGGGCTGAACTAAGACTAAAATACTTTGGAGATGAAAGCAACACTTTAGAGCCTCTACAATTTAGTTTGGCTACTATTGAAGCTGCAACAAATAGGTTTTCACAGGAAAATTGTTTAGGCCAAGGTGGATTTGGACAGGGTATTCTTTCAAATGGTCAAGAAATAGCGGTAAAGAGACTTTCCAAAGGTTCAGGCCAAGGTACCCAAAAATATAGAAGATTGACTTGGGAGGAGTGTCATGAAATCATAAGAGGAGTTGCTCGAGGAATTCAATACCTTCATGATTATTCTCGTCTTAAAATTATACACCGTGATCTCAAACCTAGCAATATTTTATTAGATAATGACATGAATCCAAAAATTTCAGATTTTGGCCTAGCAAGGATGGTTGCTATCAATGAAAATGAGGGAAATACAAGGAGAATTGTTGGAACATATGGTTATATGCCTCCAGAATATGCAATGTTCGGATTGTATTCTGAAAAATCCGATGTTTTCAGTTTTGGAGTTATAGTCTTAGAAATCATCAGTGGAAAGAAGAATGCAAGTTGTCATGATGACTCACAATATGCTGATAGCCTCTTAAGCTATACATGGAATCAATGGAGTAATGAAAAGTTGCTAGAGATGTTGGATTCAAATCTGAAAGAAATGGAATCGTATAATGAAGTGACAAGGTGCATTCAAATTGGATTGCTATGTGTTCAAAAGCATCCAGATGCAAGACCTTCCATGGCTACAATTGTTTCATATCTGAGCAACGAATCAATTGAATTGCCACCTCCACAGCAACCTGCTATGTTTTTAAAACCTCGAAGGGGACTTACCTCTGCAAGTAAAGAATATAGCTCCATTAATGACATGTCTATTAGTGATTTCTTTCCTCGCTAG 1803 0.4132 MFLINMPSHKIILLFFFTSFLYFSNTQAQPTYTNSSCSPNNFTANSSFQSSLTTLLSSLASNKTNNTDFFNTTVHGGGGNTVYGLFMCRGDVNLTTCHQCVIDATTRIRSLCNFSKEAVIWYEECMLRYSDQYFFSSVDTSPNRCGANSNNVANNQTGFMNLLSTTMNTAADEAAKPASGLKKFATQEASLQFQTMYCLVQCTPDLSPEGCRTCLKSAIDELFKCSDNSIGGRVLYPSCNVRYELFIFYNSSGQPRSPPPPAIFQAVNQGNTRTVVIVVVSVGSAAILFCLVYYILWNLVKKRRRAELRLKYFGDESNTLEPLQFSLATIEAATNRFSQENCLGQGGFGQGILSNGQEIAVKRLSKGSGQGTQKYRRLTWEECHEIIRGVARGIQYLHDYSRLKIIHRDLKPSNILLDNDMNPKISDFGLARMVAINENEGNTRRIVGTYGYMPPEYAMFGLYSEKSDVFSFGVIVLEIISGKKNASCHDDSQYADSLLSYTWNQWSNEKLLEMLDSNLKEMESYNEVTRCIQIGLLCVQKHPDARPSMATIVSYLSNESIELPPPQQPAMFLKPRRGLTSASKEYSSINDMSISDFFPR 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0420 600 ProSiteProfiles Gnk2-homologous domain profile. 140 248 IPR002902 -
Mibi03g0420 600 Pfam Protein kinase domain 377 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0420 600 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 30 133 - -
Mibi03g0420 600 Pfam Salt stress response/antifungal 145 244 IPR002902 -
Mibi03g0420 600 Pfam Salt stress response/antifungal 37 131 IPR002902 -
Mibi03g0420 600 FunFam Cysteine-rich receptor-like protein kinase 25 142 248 - -
Mibi03g0420 600 ProSiteProfiles Protein kinase domain profile. 261 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0420 600 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Mibi03g0420 600 FunFam cysteine-rich receptor-like protein kinase 10 370 563 - -
Mibi03g0420 600 SUPERFAMILY Protein kinase-like (PK-like) 320 583 IPR011009 -
Mibi03g0420 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 405 417 IPR008271 GO:0004672|GO:0006468
Mibi03g0420 600 SMART serkin_6 337 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0420 600 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 376 595 - -
Mibi03g0420 600 Gene3D Transferase(Phosphotransferase) domain 1 366 563 - -
Mibi03g0420 600 Gene3D - 141 248 IPR038408 -
Mibi03g0420 600 Gene3D - 29 134 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0420 Mibi-ChrMibi03 5378561 5381694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0420 14 600 Receptor kinase-like Gene Family AT4G05200 38.152 1.35e-146 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g0420 Pkinase 3.1e-30 CL0016