Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0419 ATGATCTTCAAGATCATAATTCTCTCTCTCTTCTTCGTCACCCTTTTCAATTCTTCTTCAGCTCAAGTCGAAGGTCGTAATGATCTCTACCCTCAATGCTCTACCACCAAAAATTTCACCTCCAATAGTACCTTCGACTCTAACCTCCAAACCCTCTTTTCCTCCCTAACTTCCAACCAAACTGCCAACCGCGACTTCTACAACACCACCGTTGGCCACGGCAGCGACACCGTGTACGGCCTCTTCATGTGTCTAGGCTCCGCAGAGCTGGAATCATGCCATTACTGCGTCGGAAACTCAACGTTACAGCTATACGAGACGTGTCGCCTTTCGAAGGACGCCGTAAACTGGCGTGACACGTGTTTGGTTCGCTATTCCGACCGGAACTTCTTCTCCACCTTCGATACAAGGCCGAGGCTTCGAATGTTAAACCCTAATAATGTGTCAAACCAGGTCGGGTTTATGGATGTGTTGAGGACTGTTATGAACCTGACGGCGGATGAGGCGGCTAAGACTGGTTTGATGAAGAAGAAGTATGCAGTGAATGCTGCGACGGTGGAGTTTCAGACTTTGTATGTTTTGGTTCAGTGTACGCCGGATCTTTTGACGGATGATTGTAAGAAATGCTTGAATGGTGTGATTGGGGACTTTACATGGTGTTGTGATGGGAAGATAGGAGGAAGAATGTACTATCCAAGTTGCTTCGCTCGTTATGAGTTGTATCCGATCTTTGATAATGCTTCTAATATTAGGCCAATCACTCTTTCACCTCCTCCGGCTTTAGTTTCTCCTCCAAATCCTGTAGAAAGGAAAAGCCGATTAAAGACCATTGTGATCGCTGTCGTTTCTCCTGTTGGTGCTGTGATACTTCTGTGTTTGGCCTACTCTTTAATACTGAAGAATCAAATAAAAAAGATGCGTATGGCATTTCTCATGCAAAAATACTTTGGAAGTGAAAGCAACACTTTAGAGCCTCTGCAATTCAGTTTGGCTACTATTGAAGCAGCAACAAATAAGTTTTCAAAGGAGACTAGTTTAGGTCAGGGTGGATTTGGACAAGTTTATAAGGGCACTCTTCCAAATGGTCAAGAAATAGCTGTAAAGAGACTCTCAAAAGGTTCTGGCCAAGGAGCAGAAGAATTTAAGAATGAGGTTTTGTTAATAGCCAGACTCCAGCATAGAAATTTGGTAGCCTTGCTAGGATTTTGTATTGAAGGGCAGGAGAAAATTCTCATTTATGAATATGTTCCCAACAAAAGTCTTGACCACTTTTTATTTGGTTCTGAAAAGAGCAAAGTATTAAATTGGGAGGAACGATACAAAATTATAGGAGGAGTTGCCAGGGGAATTCTATACCTTCATGATTATTCTCGAGTTAAGATTATACATCGTGACCTTAAGCCCAGCAATATTTTATTAGATGATGAATTGAATCCAAAAATTTCAGATTTTGGTATGGCTAGAATAGTTGGAATTAACGAAATTGACGGAAGTACGAACAAAATTGTTGGAACATATGGTTATATGTCTCCAGAATATGCTATGTTTGGACAATATTCTGAAAAATCAGATGTATTTAGCTTTGGAGTAATAGTATTAGAAATTATTAGTGGGCAGAAGATTACAAGTCATCCTGATCAATCTCATGGCCTCCTAAACTATGCTTGGAATCAATGGAAGGAAGAAAAGATTTTAGAGATATTGGATTCAAATCTAAATGAATCTGATTCGTTTAATGAGGTGAACACGTGCGTTCAAATTGGGTTGTTATGTGTTCAAGAAGATCCAGAAGCAAGGCCTTCCATGGCTACTGTTGTTTCCTATCTCAGCAATGATTCAATTCAATTGCCATTTCCAGAAGAACCTGCATTCTTTCTGGAGGGTCAAATGGAGCTTAATACTGAAAGCAAAGAATCTATTAATGAAATGTCTATAAGTGAATTCCATCCTCGATAG 1956 0.4054 MIFKIIILSLFFVTLFNSSSAQVEGRNDLYPQCSTTKNFTSNSTFDSNLQTLFSSLTSNQTANRDFYNTTVGHGSDTVYGLFMCLGSAELESCHYCVGNSTLQLYETCRLSKDAVNWRDTCLVRYSDRNFFSTFDTRPRLRMLNPNNVSNQVGFMDVLRTVMNLTADEAAKTGLMKKKYAVNAATVEFQTLYVLVQCTPDLLTDDCKKCLNGVIGDFTWCCDGKIGGRMYYPSCFARYELYPIFDNASNIRPITLSPPPALVSPPNPVERKSRLKTIVIAVVSPVGAVILLCLAYSLILKNQIKKMRMAFLMQKYFGSESNTLEPLQFSLATIEAATNKFSKETSLGQGGFGQVYKGTLPNGQEIAVKRLSKGSGQGAEEFKNEVLLIARLQHRNLVALLGFCIEGQEKILIYEYVPNKSLDHFLFGSEKSKVLNWEERYKIIGGVARGILYLHDYSRVKIIHRDLKPSNILLDDELNPKISDFGMARIVGINEIDGSTNKIVGTYGYMSPEYAMFGQYSEKSDVFSFGVIVLEIISGQKITSHPDQSHGLLNYAWNQWKEEKILEILDSNLNESDSFNEVNTCVQIGLLCVQEDPEARPSMATVVSYLSNDSIQLPFPEEPAFFLEGQMELNTESKESINEMSISEFHPR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0419 651 CDD STKc_IRAK 346 609 - -
Mibi03g0419 651 Gene3D Transferase(Phosphotransferase) domain 1 416 616 - -
Mibi03g0419 651 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 416 617 - -
Mibi03g0419 651 SMART serkin_6 340 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0419 651 ProSiteProfiles Protein kinase domain profile. 340 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0419 651 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Mibi03g0419 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Mibi03g0419 651 FunFam Cysteine-rich receptor-like protein kinase 10 302 415 - -
Mibi03g0419 651 Gene3D Phosphorylase Kinase; domain 1 301 415 - -
Mibi03g0419 651 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Mibi03g0419 651 SUPERFAMILY Protein kinase-like (PK-like) 323 632 IPR011009 -
Mibi03g0419 651 Pfam Protein kinase domain 341 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0419 651 ProSiteProfiles Gnk2-homologous domain profile. 136 243 IPR002902 -
Mibi03g0419 651 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 130 - -
Mibi03g0419 651 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 647 - -
Mibi03g0419 651 Pfam Salt stress response/antifungal 149 241 IPR002902 -
Mibi03g0419 651 Pfam Salt stress response/antifungal 33 127 IPR002902 -
Mibi03g0419 651 Gene3D - 138 243 IPR038408 -
Mibi03g0419 651 Gene3D - 27 130 IPR038408 -
Mibi03g0419 651 FunFam Cysteine-rich receptor-like protein kinase 25 138 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0419 Mibi-ChrMibi03 5369961 5374857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0419 8 627 Receptor kinase-like Gene Family AT4G05200 44.866 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g0419 Pkinase 2.9e-50 CL0016