Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0409 ATGCATACTTCTAGCAAATTCGGTCCCCTACCATACTTGCTAATTTACACATTAGCACTCAGCTTATGGGGAAACGCATCCACATCCCGTCCCGTTTTTCATAACAAGGCATCATTCATCTTCTTCAAATTCTTCGGCCTAAAACTCCCCAACTCTTTAGGAAGGCATATTGTTTTCCAACCAACTGGGTATATGCAGCCTTCTCCTTTTCCCTCGATACTGTTTTGCAACAATTTAGAACCTCTGCAATTTAGTTTGGCCACCATTGAAGCTGCAACAAACAAGTTTTCACATGAAAACTGTCTAGGCCAAGGTGGATTTGGACAAGTTTACAAGGGTATTCTTTCAAATGGGCAGGAAATAGCTGTCAAGAGACTTTCAAAAAGTTCTGGTCAAGGCGGAGAAGAATTCAAAAATGAGGTTTTATTAATTGCCAAACTCCAACACAGAAATTTGGTAACCTTACTCGGATTTTGCATAGAAGAACAAGAGAAAATTCTTCTTTATGAATATGTTCCAAACAAAAGTCTAGACTACTTTCTATTTGGTTCTCAAAAAGACAAATTATTAAATTGGGCAGAACGTTGTAAAATTATTGGAGGAGTTGCTCGAGGAATTCTTTATCTTCATGAATATTCTCGTCTTAAAATTATACATCGTGATTTAAAACCAAGCAATATCTTGTTAGACGACGAAATGAACCCAAAAATTTCAGATTTCGGCTTAGCTAAGATGGTTGCTATCAACACAAATGAGGGAAGCACAAATAGAATAGTTGGGACATATGGTTACATGTCTCCAGAATACGCAATGTACGGCCAATATTCTGAAAAATCTGATGTTTTTAGTTTTGGAGTTATAATTCTAGAAATAATTAGTGGAAAGAAGAATACAAGGTGTCATAGTCATTCACAATATGCTGATGGCCTATTGAGCTGCGCTTGGAAGCAATGGAAGGAGGATAAGTTGCTGGAGGTAATAGATTTAAATATAAAAGAATTTGGATCATATAATGAAGTGGTCAAGTGCATCCAGGTTGGTTTGTTATGTGTTCAAGAGAATCCAGATACAAGACCCACGATGGCTGAGGTTGTGTCATACCTTAGTACCGCCGGTTCCATTCAACTGCCATTGCCACAAGAACCTGCATTCTTTCTACATGGTGGAATGGGGCCTAGTACCAGCGGAAGTCGAAGTAAGGAATCAGGCTCCACTATTGAAGTATCTATGAGTGAATTCTTTCCTCGTTAG 1251 0.3837 MHTSSKFGPLPYLLIYTLALSLWGNASTSRPVFHNKASFIFFKFFGLKLPNSLGRHIVFQPTGYMQPSPFPSILFCNNLEPLQFSLATIEAATNKFSHENCLGQGGFGQVYKGILSNGQEIAVKRLSKSSGQGGEEFKNEVLLIAKLQHRNLVTLLGFCIEEQEKILLYEYVPNKSLDYFLFGSQKDKLLNWAERCKIIGGVARGILYLHEYSRLKIIHRDLKPSNILLDDEMNPKISDFGLAKMVAINTNEGSTNRIVGTYGYMSPEYAMYGQYSEKSDVFSFGVIILEIISGKKNTRCHSHSQYADGLLSCAWKQWKEDKLLEVIDLNIKEFGSYNEVVKCIQVGLLCVQENPDTRPTMAEVVSYLSTAGSIQLPLPQEPAFFLHGGMGPSTSGSRSKESGSTIEVSMSEFFPR 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0409 416 ProSiteProfiles Protein kinase domain profile. 96 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0409 416 CDD STKc_IRAK 102 368 - -
Mibi03g0409 416 FunFam cysteine-rich receptor-like protein kinase 10 172 376 - -
Mibi03g0409 416 Gene3D Transferase(Phosphotransferase) domain 1 172 375 - -
Mibi03g0409 416 MobiDBLite consensus disorder prediction 392 409 - -
Mibi03g0409 416 SMART serkin_6 96 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0409 416 FunFam Cysteine-rich receptor-like protein kinase 10 73 171 - -
Mibi03g0409 416 Gene3D Phosphorylase Kinase; domain 1 71 171 - -
Mibi03g0409 416 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 79 397 - -
Mibi03g0409 416 MobiDBLite consensus disorder prediction 389 416 - -
Mibi03g0409 416 SUPERFAMILY Protein kinase-like (PK-like) 81 385 IPR011009 -
Mibi03g0409 416 Pfam Protein kinase domain 98 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0409 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Mibi03g0409 416 ProSitePatterns Protein kinases ATP-binding region signature. 102 124 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0409 Mibi-ChrMibi03 4828400 4830879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0409 82 387 Receptor kinase-like Gene Family AT3G45860 59.609 2.46e-129 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g0409 Pkinase 3e-50 CL0016