Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0398 ATGAGAACATTGTATGATACTATGAATAAGACGGCAGATGAAGCTACCAATTCTACTTTGGGGAAAAAGAAGTATGCGGTTGGAACTGCGAATTTCTCGGCGTTTCAAACTGTGTATTGTTTAGCTCAGTGTACGCCTGACCTTTCGCCTGAGGATTGTAGAAGGTGTCTTAGTGGTACAATTGGGGACCTTAATTGGTGTTGTAATGGGAAGCAAGGAGGAAGAGTTCTGTACCCAAGTTGTAATGTTCGCTATGAATTGTACCCTTTTTATCAAACATCAGCTCCGGCGCCAACTCCGGCACCGGCGATCGTTCCTCCGACTGGTTCCCAAGGAAAAGGTGGGATCTCATCCGGGACGATTGTTGCAATTGTGGTTCCAATTTCAGTGGCTGTTGTGATATTTATAGTTGGTATTTGTTGCTTGAGTAAACGAATGAGGAAGAAGCATGATTCTGTTCCTGAAGGAAAATCTGCAACTGATATCAGCAACGTGGATTCTCTGCAATATGATTTCAGTACAATTGAAGAAGCCACGAACAAATTCTCTGAAGGTAACAAGCTCGGTGAAGGCGGGTTCGGAGTGGTTTACAAGGGCATACTTGCAAGTGGAGAAGAAATTGCTGTGAAGAGACTCTCTCGAGGCTCTGGACAAGGTGTACAAGAATTTAAGAATGAAGTAGAGGTGGTTGCCAAGTTACAACACAGGAATTTAGTGAGGCTTTTGGGTTTTTGTGTGCAAGGAGAAGAGAAGATACTTGTTTATGAATATGTTCCCAACAAAAGTCTTGATTACATCCTTTTTGATCCTGAAAAGCAAAGACAACTGGATTGGATGAAGCGTTATAGGATTGTGAAAGGAATTGCTCGAGGCATTAAATATCTTCATGAAGATTCGAGGCTTAAAATTATTCACCGTGATCTTAAAGCTAGCAATGTATTATTAGATAGTGATTTGAATCCAAAAATCTCCGATTTTGGTATGGCAAGAATTTTTATGGTGGACCAAACCCAAGGAAATACTAGCCGAATTGTTGGAACATATGGGTATATGTCTCCAGAATACGCTATGCATGGAGAGTTTTCTGTTAAGTCGGATGTGTACAGTTTCGGCGTCCTTCTGATGGAGATTATAAGCGGGAAGAAGAATAGTTCTTTCTATCAAATGGAGGGTGCTGAAGACCTGATAAGCTATGCCTGGAAACTTTGGAAGGATGGAGAACCCTTGGAATTATTGGACCCCACAATAAGAGAATCTTACACTCCAAATGAAGTAATGAGATGTGTCCATATTGGTTTACTGTGTGTTCAAGAAGATCCAGCTGATAGGCCTTCAATGGCATCCATAGTTCTAATGCTTGATAGTTATTCTGTGACTCTGCCAACTCCTTCGCAGCCTGCATTTTTTGTGCAAAGCGGAACTGATCCAAATATGCCAAAGGACTTTCCATTTGGTCAATCTACGACCAAGTCAGCACCAATGTCAGTCAATGACATGTCTGTTAGTGAAGTAATGCCTCGGTAA 1524 0.416 MRTLYDTMNKTADEATNSTLGKKKYAVGTANFSAFQTVYCLAQCTPDLSPEDCRRCLSGTIGDLNWCCNGKQGGRVLYPSCNVRYELYPFYQTSAPAPTPAPAIVPPTGSQGKGGISSGTIVAIVVPISVAVVIFIVGICCLSKRMRKKHDSVPEGKSATDISNVDSLQYDFSTIEEATNKFSEGNKLGEGGFGVVYKGILASGEEIAVKRLSRGSGQGVQEFKNEVEVVAKLQHRNLVRLLGFCVQGEEKILVYEYVPNKSLDYILFDPEKQRQLDWMKRYRIVKGIARGIKYLHEDSRLKIIHRDLKASNVLLDSDLNPKISDFGMARIFMVDQTQGNTSRIVGTYGYMSPEYAMHGEFSVKSDVYSFGVLLMEIISGKKNSSFYQMEGAEDLISYAWKLWKDGEPLELLDPTIRESYTPNEVMRCVHIGLLCVQEDPADRPSMASIVLMLDSYSVTLPTPSQPAFFVQSGTDPNMPKDFPFGQSTTKSAPMSVNDMSVSEVMPR 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0398 507 Gene3D - 1 90 IPR038408 -
Mibi03g0398 507 SUPERFAMILY Protein kinase-like (PK-like) 168 473 IPR011009 -
Mibi03g0398 507 Pfam Salt stress response/antifungal 6 88 IPR002902 -
Mibi03g0398 507 FunFam cysteine-rich receptor-like protein kinase 10 258 460 - -
Mibi03g0398 507 MobiDBLite consensus disorder prediction 484 498 - -
Mibi03g0398 507 ProSitePatterns Protein kinases ATP-binding region signature. 188 210 IPR017441 GO:0005524
Mibi03g0398 507 Gene3D Transferase(Phosphotransferase) domain 1 258 461 - -
Mibi03g0398 507 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 19 503 - -
Mibi03g0398 507 Pfam Protein tyrosine and serine/threonine kinase 185 451 IPR001245 GO:0004672|GO:0006468
Mibi03g0398 507 Gene3D Phosphorylase Kinase; domain 1 142 257 - -
Mibi03g0398 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672|GO:0006468
Mibi03g0398 507 FunFam Cysteine-rich receptor-like protein kinase 10 144 257 - -
Mibi03g0398 507 ProSiteProfiles Gnk2-homologous domain profile. 1 90 IPR002902 -
Mibi03g0398 507 MobiDBLite consensus disorder prediction 484 507 - -
Mibi03g0398 507 CDD STKc_IRAK 188 454 - -
Mibi03g0398 507 FunFam Cysteine-rich receptor-like protein kinase 25 1 90 - -
Mibi03g0398 507 ProSiteProfiles Protein kinase domain profile. 182 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0398 507 SMART serkin_6 182 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0398 Mibi-ChrMibi03 4457383 4459889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0398 13 507 Receptor kinase-like Gene Family AT4G05200 56.016 0.0 596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g0398 PK_Tyr_Ser-Thr 5.2e-51 CL0016