Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0396 ATGTCCTCCTCCAAATTCTCTGCGACACCCTTCATCCTCCTCGCTCTGTTTCCATTCCCATTTCTAAGTTCCACAGTCAAAGCATCACCCACATACAGCTCTTTTGCCTGCACAGATTCACTCACCTACAAACCCAACACCACATTTGAATCCAACTTGAACACCCTCCTCTCTGTTCTTACCTCCAACTCCTCCCTCCACAATGGTTTCTTCCGTACAACCGTATCTCAAGGAACTCCCTCCGCCATCAACGGCCTTTTCCTCTGCCGTGGCGACACCACCCCAAACATCTGCCAAGACTGTGTCACGGCCGCCGCCAAAGAAATCAAAATTCGGTGTCCCAACCAAACAGAATCTATCATATGGTACGATGTTTGTCTCCTTAGATACTCTAATAACACATTCAACAACATCGTACCTTCCACGGACTTGTCGGATAATTCTAGTATAGCTAGCTCTGAACAAGATCAGTTTAATCAATTGTTGTCGACAAAGTTGCAAACTTTGGCTGCAGAAGCGAAAGATTCACAGACGGGGAAGAAGTTTGCGACGGGAGAAGCGAATTTAACATCTTCACAAACGTTGTATGGACTTGTGCAGTGTTATCCTGACTTGTCGGCTTTTGATTGTAACATGTGTATCCAAAGTGCCATTGGGGCTTTGCCTAATTGTTGTAGCAACAAGAAGGGGGCAACGGTTTTGCTTCCAGCATGTAACATTAGATATGAACTTTACCCTTTTTACAATATAACCCTTACATCCACCTCACCACCAGATTCTCATCGATCAGGAAAAAGCAATATCCCAATAATTGTTGCGATTATTGTGCCGATTGTTGTTTTTGTGACACTTTTGGTTGGGGCTTGCTTGTTCCTACTTAAGAAGAAGGCTAGAAAGATCAAGAAGTATAATAGTTTCACAGAGGATGACATTGGGAATGATCTTACAGACGTAGAGTCTCTGCAATTTGAATTGGCGACAATAGAAGCTGCCACTAAAAGGTTCTCAGATGAGAACAAGATTGGCCAAGGTGGATTTGGTGCAGTTTATAAGGGTATCCTCCCAAATGGACAAGTGATTGCTGTGAAGAGGTTGTCAGTAACCTCCTTGCAGGGTGCTTTGGAATTTAAGAATGAAGCTGCTCTTGTGGCCAAGCTTCAACACAGGAATTTAGTGAGGCTATTGGGATTTTGCTTGGAGGGGCAAGAGAAGATACTTGTTTATGAATACATCCCAAACAAAAGCCTTGATCACTTTCTATTTGATTCTGAGAAGAAAACAATGCTTGATTGGTCAAGGCGTTACAAGATTATTATGGGAATCGCTCGAGGGATGCTGTATCTTCATGAAGATTCTCAACTTAGAATAATACACCGTGATCTCAAAGCAAGCAATGTTTTAATAGATGCCAATATGAACCCAAAAATTTCAGATTTTGGCATGGCGAAAATCTTTCATGGAGAACAAACTCAAGTAAACACAGGAAGAATTGTTGGAACCTTTGGTTATATGTCTCCAGAGTATGCAATGCGCGGGCAATTTTCGGTGAAATCAGATGTGTTCAGTTTCGGCATTTTGGTTTTAGAGATTGTTACCGGCAAAAAGAACACTGAGGCTTACCAATCACATCAAGCAGAAGACCTCCTAAGCTATGCCTGGACAAATTGGACACAGAACACACCTTTGGAGTTGTTGGATCCGACACTGAGAGGTTCATATTCAAGAAATGAAGTCATAAGATGCATTCATATTGCTTTATTATGTGTTCAGGAGAATCCTTCTGATAGACCTTCTATGGCAACTATCGCACTTATGCTCAACAGTTATTCTGTTACTTTGTCATTACCCCGACAGCCGGCGGCTTTCATGCGCAGAACACCGAACAGGCAAAATGATGGTGTTGATTCTGATCAATCTACTTCGTCATTCCTATGGTCTAAAAATGAAGCATCTATTACAGAAGTTTATCCTCGATAA 1977 0.4213 MSSSKFSATPFILLALFPFPFLSSTVKASPTYSSFACTDSLTYKPNTTFESNLNTLLSVLTSNSSLHNGFFRTTVSQGTPSAINGLFLCRGDTTPNICQDCVTAAAKEIKIRCPNQTESIIWYDVCLLRYSNNTFNNIVPSTDLSDNSSIASSEQDQFNQLLSTKLQTLAAEAKDSQTGKKFATGEANLTSSQTLYGLVQCYPDLSAFDCNMCIQSAIGALPNCCSNKKGATVLLPACNIRYELYPFYNITLTSTSPPDSHRSGKSNIPIIVAIIVPIVVFVTLLVGACLFLLKKKARKIKKYNSFTEDDIGNDLTDVESLQFELATIEAATKRFSDENKIGQGGFGAVYKGILPNGQVIAVKRLSVTSLQGALEFKNEAALVAKLQHRNLVRLLGFCLEGQEKILVYEYIPNKSLDHFLFDSEKKTMLDWSRRYKIIMGIARGMLYLHEDSQLRIIHRDLKASNVLIDANMNPKISDFGMAKIFHGEQTQVNTGRIVGTFGYMSPEYAMRGQFSVKSDVFSFGILVLEIVTGKKNTEAYQSHQAEDLLSYAWTNWTQNTPLELLDPTLRGSYSRNEVIRCIHIALLCVQENPSDRPSMATIALMLNSYSVTLSLPRQPAAFMRRTPNRQNDGVDSDQSTSSFLWSKNEASITEVYPR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0396 658 Gene3D Transferase(Phosphotransferase) domain 1 411 615 - -
Mibi03g0396 658 SMART serkin_6 335 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0396 658 Gene3D Phosphorylase Kinase; domain 1 295 410 - -
Mibi03g0396 658 SUPERFAMILY Protein kinase-like (PK-like) 321 632 IPR011009 -
Mibi03g0396 658 ProSiteProfiles Protein kinase domain profile. 335 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0396 658 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 294 410 - -
Mibi03g0396 658 FunFam Cysteine-rich receptor-like protein kinase 10 141 247 - -
Mibi03g0396 658 CDD STKc_IRAK 341 607 - -
Mibi03g0396 658 Pfam Protein tyrosine and serine/threonine kinase 338 603 IPR001245 GO:0004672|GO:0006468
Mibi03g0396 658 ProSiteProfiles Gnk2-homologous domain profile. 31 135 IPR002902 -
Mibi03g0396 658 Pfam Salt stress response/antifungal 37 132 IPR002902 -
Mibi03g0396 658 Pfam Salt stress response/antifungal 152 245 IPR002902 -
Mibi03g0396 658 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 30 135 - -
Mibi03g0396 658 FunFam cysteine-rich receptor-like protein kinase 10 411 613 - -
Mibi03g0396 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Mibi03g0396 658 ProSiteProfiles Gnk2-homologous domain profile. 140 247 IPR002902 -
Mibi03g0396 658 Gene3D - 143 247 IPR038408 -
Mibi03g0396 658 Gene3D - 31 135 IPR038408 -
Mibi03g0396 658 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Mibi03g0396 658 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 38 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0396 Mibi-ChrMibi03 4441427 4444084 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0396 13 658 Receptor kinase-like Gene Family AT4G05200 49.180 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g0396 PK_Tyr_Ser-Thr 1.2e-49 CL0016