Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0395 ATGTTAATCGACACTGTTCGTTATCTTCTCACCACCATGTCCATCTTCATCCTCCTATCTCTCTTTCCATTTCTTAGCTTCACAACCGAAGCTTCTCCAAGTTACAGAAGTCATGTATGCACTAATGGAACTTTTTTCCAACCCAACACTCCATACCAAGCCAACTTGAATTCCCTTCTCTCTTCCCTCACCTCCATCTCCTCTCTCCCCAACGGTTACTACCGTACCACCGTCTCCGCCGTCACCGGACTTTTCCTCTGCCGTGGTGACGTCACTTCCGCCGTCTGCCAATCTTGCGTCACCACAGCATCAAAGGAAATAACACGCCTCTGCCCAAACCAAACAGAGTCCATAATTTGGTACGATGTATGTATGCTTCGTTACTCCAATGGGGAATTGAATCCAATGGTCCCTGCGGTGAATTTGAGAAACACCAACATCATAGCTAGCTCCGAACAGAGTCGATTTGACACAGTTTTGGCGAACATGTTGAATGATGTGACAGGAAGAGCCAATACCCTTAAGACAGGGAAGAAGTTTGCTACTTCGGAAGTGAACTTTACATTGTCTGAAACTTTGTACGGCCTCGCACAGTGTGTTCCTGATATGTCTGATTCTATTTGTACTTCTTGTTTTAGAAGTGCTATTTCATCTCTTCCAAGTTGTTGTAGTGGAAGCAAAGGGGCAGATTTTTTGGTTCCATCATGTAATATAAGATATGAATTTTATCCATTTTACAATGTAACCAGCGTTTCATCTGAACCATTTGTTCCTCCTGCTTCAGGAAGTAGAAATATATCAATGATTGTCGCGATTGTTGTCCCGATTGTTGCTGTTTTCGCACTTCTGGTTGTGGGTTGTTGTTTCCTCCGTAAGAGAGCAAGCAAGAAGTACAATACATTCACAGAGGATGGAACTGGGATTGATATCTCGGAGATAGAGTCTTTGCAGTTTGAATTGGCTGCAATAGAAGCTGCCACAAAAAAGTTTTCAGATGAGAACAAGATTGGCCAAGGTGGATATGGGGCAGTTTACAAGGGCATCCTACCAAACAGACAGGAGATAGCTGTGAAGAGGTTGTCGGTAACCTCGTTGCAGGGTGCTTTGGAGTTTTCAAATGAAGTTGCTCTTGTTGCCAAGCTTCAACACAGGAATTTAGTAAGGCTGTTGGGATTTTGCTTAGAGGGCCAAGAGAAGATACTTGTCTATGAATATATCCCAAACAAAAGCCTCGACATGTTTCTATTTGATCCAGAAAGGAAAAGATTGCTAGATTGGTCAAAACGCTACAAGATTATTGCAGGCATTGCTCGAGGAATGCTATATCTCCACGAGGATTCTCAACTCAGAATAATTCATCGTGATCTCAAACCTAGTAATATTTTACTAGATGCTAATATGAATTCGAAGATTTCAGACTTTGGCATGGCCAAAATCTTTCAAGGTGATCAGACTCAAGTGAATACAGGAAGAATAGTTGGAACTTATGGTTACATGTCTCCAGAATATGCAATGCATGGACAATTTTCTATTAAATCAGACGTGTTTAGTTTTGGCGTCTTACTTTTAGAGATTATTACTGGCAAGAAGAGCACTGATTTGTACCAATCACCTCACTCCAATGACCTCTTAAGCTATGCCTGGAATAACTGGACACAAAAAACGCCTTTGGAATTGTTGGATCCAACACTGAGAGGATCTTATTCAAGAAATGAAGTCATAAGATGCATCCATATTGCTTTATTATGTGTTCAGGAGAATCCTTCTGATAGACCTTCTATGGCAAATATAGTACTTATGCTCAACAGTTACTCTGTTACTTTATCATTACCTCAAAAGCCCGCCTCCTATACACGCCGAAGAACACCGAACAGGCAAAACAATAATGGTGTTGATTCTGACCAATCTACTCGTTCGATTCTGTGGTCTACAAATGAAGCATCCATCACTGAAGTTTACCCTCGATAA 1968 0.4151 MLIDTVRYLLTTMSIFILLSLFPFLSFTTEASPSYRSHVCTNGTFFQPNTPYQANLNSLLSSLTSISSLPNGYYRTTVSAVTGLFLCRGDVTSAVCQSCVTTASKEITRLCPNQTESIIWYDVCMLRYSNGELNPMVPAVNLRNTNIIASSEQSRFDTVLANMLNDVTGRANTLKTGKKFATSEVNFTLSETLYGLAQCVPDMSDSICTSCFRSAISSLPSCCSGSKGADFLVPSCNIRYEFYPFYNVTSVSSEPFVPPASGSRNISMIVAIVVPIVAVFALLVVGCCFLRKRASKKYNTFTEDGTGIDISEIESLQFELAAIEAATKKFSDENKIGQGGYGAVYKGILPNRQEIAVKRLSVTSLQGALEFSNEVALVAKLQHRNLVRLLGFCLEGQEKILVYEYIPNKSLDMFLFDPERKRLLDWSKRYKIIAGIARGMLYLHEDSQLRIIHRDLKPSNILLDANMNSKISDFGMAKIFQGDQTQVNTGRIVGTYGYMSPEYAMHGQFSIKSDVFSFGVLLLEIITGKKSTDLYQSPHSNDLLSYAWNNWTQKTPLELLDPTLRGSYSRNEVIRCIHIALLCVQENPSDRPSMANIVLMLNSYSVTLSLPQKPASYTRRRTPNRQNNNGVDSDQSTRSILWSTNEASITEVYPR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0395 655 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 291 405 - -
Mibi03g0395 655 CDD STKc_IRAK 336 602 - -
Mibi03g0395 655 Gene3D - 33 132 IPR038408 -
Mibi03g0395 655 Gene3D - 139 245 IPR038408 -
Mibi03g0395 655 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Mibi03g0395 655 MobiDBLite consensus disorder prediction 615 637 - -
Mibi03g0395 655 ProSiteProfiles Gnk2-homologous domain profile. 136 245 IPR002902 -
Mibi03g0395 655 Gene3D Transferase(Phosphotransferase) domain 1 406 614 - -
Mibi03g0395 655 FunFam Cysteine-rich receptor-like protein kinase 10 138 245 - -
Mibi03g0395 655 FunFam cysteine-rich receptor-like protein kinase 10 406 608 - -
Mibi03g0395 655 Pfam Protein tyrosine and serine/threonine kinase 333 600 IPR001245 GO:0004672|GO:0006468
Mibi03g0395 655 SMART serkin_6 330 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0395 655 Pfam Salt stress response/antifungal 40 130 IPR002902 -
Mibi03g0395 655 Pfam Salt stress response/antifungal 150 242 IPR002902 -
Mibi03g0395 655 Gene3D Phosphorylase Kinase; domain 1 292 405 - -
Mibi03g0395 655 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 41 651 - -
Mibi03g0395 655 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 33 133 - -
Mibi03g0395 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Mibi03g0395 655 ProSiteProfiles Gnk2-homologous domain profile. 34 133 IPR002902 -
Mibi03g0395 655 ProSiteProfiles Protein kinase domain profile. 330 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0395 655 SUPERFAMILY Protein kinase-like (PK-like) 316 628 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0395 Mibi-ChrMibi03 4436952 4439737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0395 18 655 Receptor kinase-like Gene Family AT4G05200 49.554 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g0395 PK_Tyr_Ser-Thr 1.8e-49 CL0016