Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0391 ATGGCAGCTTCCAAATTCTACACACTAATCACTTCCCTCTTGATCTTCTTCATCACAAGCAAAGCATCATCTTCTTCTTTTAATTACACAGCTCATTATTGTTCAAACACAACCATAATCCCCACAAACACAACATTCAAACGAAACCTTAATGTTCTTCTCTATTCTCTCACCACCAACGCCTCCCAATTTGGCGGCTATTACATGACCATCATGGGCTTTGGTACCACCGACGCTGTCAACGGCCTCTTCCTCTGCCGTGGTGACGTCATCTCAGCCGTCACATGCAAAGATTGCGTCACCGCCGCCGCCAACGACATAACCAACCGTTGCCCTAACCGTACGGAGGCCATAATATGGTACGACAAGTGCATGTTACGTTACACCGGAAAATATTTCCGGTACGACGGCGTCATCCCCGGCGTGAGCCTCGCCGGCGCCGGAAAAAGATTCTCCGGCGAGGACTTGCAACATTTCAACGCCTCTCTTTTCACGTTGTTGAATGATTTGACGACGAAGGCCGCGAGGTCGCCGACGGTGAAGAAGTTCGCGGTCGGCCGGGCGGTGTTATCGCCGGAGGGGGCGACGACGGTGTATGCTTTGGAGCAGTGTACGGATGACTTGACTAGTGATCAATGTGAGACATGTTTAAGGAAAGCGATTGGGGTATTTGGTAATTGTTGTGAGGGGAAACAAGGAGGGAGGGTTCTTCTTGCTTCTTGCAATATCAGATATGAATTGTACCCTTTTTACAATGTGACTGCTGTGTCACTTGGACCTGCCATAAGATTGTCTCCTCCTCCTTCAGGAAAGGAGAAAAACGAAAAGCGAACAATTGTTCTAATTGTTGTTCCAGTTTCAGTTGCTGTTTTGATATTTTGTGTTGGAGGATTTTTACTGCTGAAAAGGCGGAAGGATAAGACTACACTACTTAATGAAAGTCGTGGTGGAGAAGAAATCACCTCTCTAGAGTCGTTGCAATTCTGTTTTTCTACAATTGAAGCTGCGACAAACAATTTTTCACAGCTTAATAAAATAGGCAAAGGTGGATTTGGGGAAGTTTACAAGGGTGTGCTTCCAGATAAACGGGAAATAGCTGTGAAGAAACTTTCAAGTAAATCTAAGCAGGGTGTGGTGGAATTTAAGAATGAGATTTCACTTATTGCCAAGCTTCAACATAGAAATCTGGTTGCTTTATTTGGATTTTGCTTGCAAGAAGAGGAGAAAATGCTTATTTATGAATATGTACCTAACAAAAGCCTTGATTACTTTTTATTTGATTCTAATCCAACACGAAGGATATTGAATTGGACTGAGCGTTATAAGATCATAGGAGGCATTGCAAGAGGAATTCTATATCTACACGAGCATTCGCGTCTCAAAGTTATACATCGTGATCTCAAACCGAGTAATGTGTTGTTAGACGATAATATGAACCCAAAAATATCAGATTTTGGGTTAGCAAGAATAGTCGCCATAGATCAAAATCAAGGAAGTACTAATAGAATTGTTGGAACATTTGGCTATATGTCTCCGGAATATGCAATGCATGGACAATTTTCAGAAAAATCAGATGTATATAGTTTTGGAGTTATAATTCTAGAAATAGTTAGCGCAAAAAGAAACGCCCGATCTCCCAAGTCAAAGATTTTTGAAGATCTTTTGGGTCAGGCATGGAGACAATGGAGGAACCATACCACCCTGGAAATTCTGGACTCAAACCTAAAAGAATCATTCTCTCACAATGAAGTCGTAAAGTACATTCAAATTGGGTTATTGTGTGTGCAAGAAGACCCAGACGATAGACCTACAATGGCAACAGTTATTTCATACCTTAATACCCAATTAATTGATTTGCCGTTTCCAAGAGAACCTGCGCTCTTCAGGTACAATGGAGAATATTGCAATTGCTCAGGTCAATACTCCAATAATTCTACACCTTCTTCCATCAATGACATGTCCAAGAGTACTTTTTTCCCTCGATAA 1986 0.4199 MAASKFYTLITSLLIFFITSKASSSSFNYTAHYCSNTTIIPTNTTFKRNLNVLLYSLTTNASQFGGYYMTIMGFGTTDAVNGLFLCRGDVISAVTCKDCVTAAANDITNRCPNRTEAIIWYDKCMLRYTGKYFRYDGVIPGVSLAGAGKRFSGEDLQHFNASLFTLLNDLTTKAARSPTVKKFAVGRAVLSPEGATTVYALEQCTDDLTSDQCETCLRKAIGVFGNCCEGKQGGRVLLASCNIRYELYPFYNVTAVSLGPAIRLSPPPSGKEKNEKRTIVLIVVPVSVAVLIFCVGGFLLLKRRKDKTTLLNESRGGEEITSLESLQFCFSTIEAATNNFSQLNKIGKGGFGEVYKGVLPDKREIAVKKLSSKSKQGVVEFKNEISLIAKLQHRNLVALFGFCLQEEEKMLIYEYVPNKSLDYFLFDSNPTRRILNWTERYKIIGGIARGILYLHEHSRLKVIHRDLKPSNVLLDDNMNPKISDFGLARIVAIDQNQGSTNRIVGTFGYMSPEYAMHGQFSEKSDVYSFGVIILEIVSAKRNARSPKSKIFEDLLGQAWRQWRNHTTLEILDSNLKESFSHNEVVKYIQIGLLCVQEDPDDRPTMATVISYLNTQLIDLPFPREPALFRYNGEYCNCSGQYSNNSTPSSINDMSKSTFFPR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0391 661 Gene3D - 21 133 IPR038408 -
Mibi03g0391 661 Gene3D - 149 250 IPR038408 -
Mibi03g0391 661 Gene3D Transferase(Phosphotransferase) domain 1 416 618 - -
Mibi03g0391 661 ProSiteProfiles Protein kinase domain profile. 340 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0391 661 Gene3D Phosphorylase Kinase; domain 1 303 415 - -
Mibi03g0391 661 ProSiteProfiles Gnk2-homologous domain profile. 28 133 IPR002902 -
Mibi03g0391 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Mibi03g0391 661 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 133 - -
Mibi03g0391 661 ProSiteProfiles Gnk2-homologous domain profile. 138 250 IPR002902 -
Mibi03g0391 661 CDD STKc_IRAK 346 613 - -
Mibi03g0391 661 Pfam Salt stress response/antifungal 34 129 IPR002902 -
Mibi03g0391 661 Pfam Salt stress response/antifungal 157 248 IPR002902 -
Mibi03g0391 661 SUPERFAMILY Protein kinase-like (PK-like) 322 613 IPR011009 -
Mibi03g0391 661 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 302 415 - -
Mibi03g0391 661 ProSitePatterns Protein kinases ATP-binding region signature. 346 369 IPR017441 GO:0005524
Mibi03g0391 661 FunFam Cysteine-rich receptor-like protein kinase 10 144 250 - -
Mibi03g0391 661 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 18 657 - -
Mibi03g0391 661 SMART serkin_6 340 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0391 661 FunFam cysteine-rich receptor-like protein kinase 10 416 619 - -
Mibi03g0391 661 Pfam Protein tyrosine and serine/threonine kinase 343 611 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0391 Mibi-ChrMibi03 4390357 4393984 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0391 14 661 Receptor kinase-like Gene Family AT4G05200 45.536 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g0391 PK_Tyr_Ser-Thr 1.3e-50 CL0016