Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0390 ATGTTTCTCTTCAAAACTCCTCCTTTTCTTCTTCTTCTTCACCTTTCTGCGATTCTTTTCACACCCAGTTCTCTTGCAAATCCCATTTACAATGGCCATTTCTGCAACCAAACAACCACATACTCACCCAATTCCACATTCCAACGTAACATCAATGTCCTCCTCACTTCTCTCACCTCCAACTCCTCCTTAGATTCCTCTGGCTCCTACAACACCGTCATGGGTTTCGGCACCCCTTTCGCCGTCACCGGCTACTTCCTCTGCCGCGGCGACATCTCCGTCTCCGTTTGTCACGATTGCGTCACCGCCGCCGCCAATGACGTCATCTCCCGATGCCCAAATCATACTGAGGCTGTTATCTGGTACGATGTTTGTACGCTTCGTTTCACCAATAAGTTCTTCCGTTTTGGGAGTGTGTTTCCTGGGATGAATTTGACGGATGAGATGAGTGTGTCTAGCATTGAGATTAACCGATTTAATCAGTCTTTGTTTGGATTAATGGATGATTTGGACACAAGAGCTGCGAATTCGATAACGGATAAGAAGTTTGCGATTGGGGAAGTTAAGGTTTCGAGGTTGGTGACTGTGTATGGGCTTGCGCAATGTTCGAAGGATTTGACTTCTGAACAATGTGAAACGTGTTTGAAGAATGCCGTGGGGATTCTTCCGGTGTGCTGTGAGGGAAAGCAAGGGGCGAGAGTTTTGCTTTCTTCATGTAATGTGAGATATGAGTTGTTCCAATTCTATGATTCAACTGGTTCTTCACCTGGAAAGAAGAAATATGGATCAGGCATAATCGCAATGATTGTTATCCTTATCGTTGTTTTTGTAATCCTCTCATGTTCGGGCTTCTATTTCCTTCTGAGAAGATCAAGGACGAGTCATAGAACTATTCTCAGAGAACATTTTGGAAATGAAAGTGAGGCTTTGGAGTCGTTGCAATTTAGTTTGGCTACAGTGGAAGCAGCTACAAACAAGTTTTCACACCGGAATAAGATAGGCAAGGGTGGATTTGGAGAAGTATACAAGGGTGTTCTTAAAGATGGACGAGAAATAGCAGTTAAAAAACTTTCTAAAGGTTCAGGTCAAGGTTCAATAGAATTCACGAATGAGATTTTGCTCATAGCCAAGCTTCAACACAGGAATTTGGTGGCTTTGTTAGGATTTTGCTTGGAAGCAGAAGAAAAGATGCTTATCTACGAATATGTTCCCAACAAAAGCCTTGATTACTTTTTATTTGATACTCAAAGGAGAAAACTACTGAATTGGGTTCAGCGTTACAGAATCTTAGAAGGAGTTGCACGAGGAATTCTTTATTTACATGAGTACTCAAGACTTAAAGTTATACACCGTGATCTTAAGCCTAGTAATGTGTTGTTAGATGATAGTATGAATCCAAAGATCTCAGACTTCGGGTTGGCAAAAATAGTTGCCATAGATGATGATCAAGGAAAAACAAGAAGAATTGTTGGAACATATGGCTACATGTCTTCAGAATATGCAATGCACGGACAATTTTCTGAAAAGTCAGATGTATTCAGTTATGGGGTCATAACTTTGGAGGTAATCGGTGGAAAAAGAAATGCTCGATCATATGACTCAAATAATGTTGATGACCTTATTAGTCATGCTTGGAGACAATGGAGGGATCAAACACCATTAGAAATTTTGGACCCAAATCTAAAAGAAGCTTGCCCACATAGCGAAGTCATGAAGTGGATTCAGATTGGTTTATTATGTGTTCAAGAAAATCCAAATGATAGACCCACAATGGCTAATGTTGTTTCATATTTTAGTAGTCCTTCAGCCGAATTGCCTCAACCACGTCAACCAGCATTTTTTATGAATAATGGAATAGCAGGGGAATCCAGCTCAGGCTCTGGATCTTTATACTCTGTGAATGGTTTGTCTATTAGTAATTCTTACCCTCGGTAA 1935 0.4098 MFLFKTPPFLLLLHLSAILFTPSSLANPIYNGHFCNQTTTYSPNSTFQRNINVLLTSLTSNSSLDSSGSYNTVMGFGTPFAVTGYFLCRGDISVSVCHDCVTAAANDVISRCPNHTEAVIWYDVCTLRFTNKFFRFGSVFPGMNLTDEMSVSSIEINRFNQSLFGLMDDLDTRAANSITDKKFAIGEVKVSRLVTVYGLAQCSKDLTSEQCETCLKNAVGILPVCCEGKQGARVLLSSCNVRYELFQFYDSTGSSPGKKKYGSGIIAMIVILIVVFVILSCSGFYFLLRRSRTSHRTILREHFGNESEALESLQFSLATVEAATNKFSHRNKIGKGGFGEVYKGVLKDGREIAVKKLSKGSGQGSIEFTNEILLIAKLQHRNLVALLGFCLEAEEKMLIYEYVPNKSLDYFLFDTQRRKLLNWVQRYRILEGVARGILYLHEYSRLKVIHRDLKPSNVLLDDSMNPKISDFGLAKIVAIDDDQGKTRRIVGTYGYMSSEYAMHGQFSEKSDVFSYGVITLEVIGGKRNARSYDSNNVDDLISHAWRQWRDQTPLEILDPNLKEACPHSEVMKWIQIGLLCVQENPNDRPTMANVVSYFSSPSAELPQPRQPAFFMNNGIAGESSSGSGSLYSVNGLSISNSYPR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0390 644 Gene3D Phosphorylase Kinase; domain 1 290 402 - -
Mibi03g0390 644 Pfam Protein tyrosine and serine/threonine kinase 330 596 IPR001245 GO:0004672|GO:0006468
Mibi03g0390 644 SUPERFAMILY Protein kinase-like (PK-like) 311 616 IPR011009 -
Mibi03g0390 644 ProSiteProfiles Protein kinase domain profile. 327 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0390 644 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 33 622 - -
Mibi03g0390 644 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524
Mibi03g0390 644 Gene3D - 29 134 IPR038408 -
Mibi03g0390 644 Gene3D - 145 248 IPR038408 -
Mibi03g0390 644 FunFam cysteine-rich receptor-like protein kinase 10 403 605 - -
Mibi03g0390 644 ProSiteProfiles Gnk2-homologous domain profile. 29 134 IPR002902 -
Mibi03g0390 644 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 134 - -
Mibi03g0390 644 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 289 402 - -
Mibi03g0390 644 SMART serkin_6 327 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0390 644 Pfam Salt stress response/antifungal 35 131 IPR002902 -
Mibi03g0390 644 Pfam Salt stress response/antifungal 157 244 IPR002902 -
Mibi03g0390 644 FunFam Cysteine-rich receptor-like protein kinase 10 142 248 - -
Mibi03g0390 644 ProSiteProfiles Gnk2-homologous domain profile. 139 248 IPR002902 -
Mibi03g0390 644 CDD STKc_IRAK 333 598 - -
Mibi03g0390 644 Gene3D Transferase(Phosphotransferase) domain 1 403 607 - -
Mibi03g0390 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0390 Mibi-ChrMibi03 4380939 4385933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0390 4 644 Receptor kinase-like Gene Family AT4G05200 43.491 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g0390 PK_Tyr_Ser-Thr 2.2e-47 CL0016