Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0387 ATGGCTTTGGTTTCTGTTAGAATCCTTTCCTTTCTCTGTCTTATTCACATACTCATCATATCTCAAGTCACTGCCCAGCCCAGTTTTCTGTATCATTACTGTAACGTTGGTAATGGCAACTTCACTGCTAATAGTGCCTACCACACCAACCTCAATACCCTTTTGTCCAATATTGCTTCCAACCAAGAAATTGACTATGGCTTCTACAACTTCTCTTATGGCCAAATCAATGACAAGGTTAATGCAATAGGTTTGTGCAGAGGAGATGTTGCCCTTGATATTTGCCGTAGTTGCCTCAATGATTCTAGAACCCGCCTCACCCAGCTCTGTCCAAATCAGATGGAGGCAATTGGATTCTATGACAATTGCATGTTACGCTATTCAAACAATTCAATATTTAATACAGTTACAAATTTGCCTTCCTTGTGCATGTGGAACAATAATAATGCAACAGATGTGGGTCAGTACAATACAGTGCTGAGGAATCTGCTAGATGGTTTAAGAAGTAGTGCTTCTTCAGGAACCTCTCTTAGCAAGTTTGCTACAGCAAATGCTGAAGGTCCAAACTTTCAAACCATATATGGTCTCGTGCAGTGTACACCTGATTTATCTTCAGATCTATGCAATGACTGCTTGGTTGAGGCAATCTCTGGAATTCCAGGATGTTCTGGTGGCAAGGTTGGTGGTAGAATATTAAGGCCAAGCTGTAATTATAGATATGAAAGCTACCGCTTTTATAATGCTACCAATGATTCGACACCACCATCAAAAGGAAAGAGCAACAAATCACGAACTATAATTATTGCCATAGTTGTACCAATTGCTTCCATTGTTCTCTTGCTCATCCTTGTCTGCATCTGGTTAAGAATGAGGAAAACGTGGACACATATCAAAACTGACAATGAAATTAACTCATCCGAGACATTGCAATTGAAGTATAACACCCTCATAGCCGCCACAAATAACTTTTCTGAACAAAATAAGCTTGGACAAGGCGGATTTGGACCTGTTTACAAGCCAAGCTTCAGCATCGTAATCTATGGATATATGGCACCAGAATATGTATTGCATGGACAATTCTCTGTAAAGACGGATGTTTTTAGTTTTGGTGTTCTAGTTCTGGAGATCATAACCGGTCGTAAAAACAGTGAGGGTTTCCATGAGGAGATCGCAGAGAATCTAGTTGGCTTTGCGTGGAGAAACTGGAGGGAAGGAACAGCTACGAGTATTGTGGACCCCGCAATTACCGGAGGTTCAAGAGATGAAATAATGAGATGCGTCCACATAGGGTTGCTCTGTGTTCAAGATGATGTAGCTGACAGACCAACCATGGCTTCAGTTGAAATCATGCTTAATAGCTACTCTGCCACTTTTCCATTGCCTTCTCAACCTGCTTCTTACATGAATAGTAGAAATTTTTCGCACAGCAGGTCAAGAGAGTATACTTCAGGGTCAACAAGATCAAATGAACTTAAAAAGCAGTCTATTCAAGAAATGTCGAATGAAACATCAATGTCTCAGCCGTTTCCTCGTTAG 1536 0.4076 MALVSVRILSFLCLIHILIISQVTAQPSFLYHYCNVGNGNFTANSAYHTNLNTLLSNIASNQEIDYGFYNFSYGQINDKVNAIGLCRGDVALDICRSCLNDSRTRLTQLCPNQMEAIGFYDNCMLRYSNNSIFNTVTNLPSLCMWNNNNATDVGQYNTVLRNLLDGLRSSASSGTSLSKFATANAEGPNFQTIYGLVQCTPDLSSDLCNDCLVEAISGIPGCSGGKVGGRILRPSCNYRYESYRFYNATNDSTPPSKGKSNKSRTIIIAIVVPIASIVLLLILVCIWLRMRKTWTHIKTDNEINSSETLQLKYNTLIAATNNFSEQNKLGQGGFGPVYKPSFSIVIYGYMAPEYVLHGQFSVKTDVFSFGVLVLEIITGRKNSEGFHEEIAENLVGFAWRNWREGTATSIVDPAITGGSRDEIMRCVHIGLLCVQDDVADRPTMASVEIMLNSYSATFPLPSQPASYMNSRNFSHSRSREYTSGSTRSNELKKQSIQEMSNETSMSQPFPR 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0387 511 Pfam Protein tyrosine and serine/threonine kinase 348 389 IPR001245 GO:0004672|GO:0006468
Mibi03g0387 511 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 132 - -
Mibi03g0387 511 MobiDBLite consensus disorder prediction 469 511 - -
Mibi03g0387 511 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 12 255 - -
Mibi03g0387 511 ProSiteProfiles Gnk2-homologous domain profile. 29 132 IPR002902 -
Mibi03g0387 511 Gene3D - 139 245 IPR038408 -
Mibi03g0387 511 Gene3D - 26 131 IPR038408 -
Mibi03g0387 511 Pfam Salt stress response/antifungal 143 243 IPR002902 -
Mibi03g0387 511 Pfam Salt stress response/antifungal 34 129 IPR002902 -
Mibi03g0387 511 SUPERFAMILY Protein kinase-like (PK-like) 347 478 IPR011009 -
Mibi03g0387 511 Gene3D Transferase(Phosphotransferase) domain 1 344 484 - -
Mibi03g0387 511 Gene3D Phosphorylase Kinase; domain 1 286 343 - -
Mibi03g0387 511 ProSiteProfiles Gnk2-homologous domain profile. 138 245 IPR002902 -
Mibi03g0387 511 FunFam Cysteine-rich receptor-like protein kinase 10 140 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0387 Mibi-ChrMibi03 4367006 4370446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0387 347 511 Receptor kinase-like Gene Family AT4G05200 40.361 8.30e-38 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g0387 PK_Tyr_Ser-Thr 1.2e-07 CL0016