LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi03g0365	ATGAGGGCAAATCCTCGCGACCCTCTAAAATCTGCAAACGAAGATACCCCAGATGGAATTCGACCCTCCATTCCCGCCGCCGGAATCAACCACAGGAAAAAAGGCACCGGCGTCAGAGCATGGCTCCTAATTGACGCCACCGGCCAGACGCAAGTGGTGGAGGCTGGTAAGCACGCGATCATGCGCCGTACAGGTTTGCCTGCTCGAGATCTTCGGATTTTGGATCCGCTTCTTTCATATCCGTCCACGGTTTTGGGGCGTGAGAGAGCGATTGTTATCAATTTGGAGCATATCAAAGCTATAATCACTGCTCATGAAGTTTTGTTGTTGAATTCGAGGGACCCTTCTGTTACCCCTTTTGTTGAGGAGTTTCAGAGGAGAATTATGCATCACCATCAAGCTACTAAAGCTCAGGAGGGAAATGGCGATGATTCAAACTGGACAAAGTTGTACGATTTGGAAGAGCCACCATCTAGGACTGTTAGTCCTCGAACTCCAGATGAGGAAAGCAAAGCAGAAGAGAAACAATTCCAGAATAGAGACGGGATGAAGGTTCTCCCATTCGAGTTTGTAGCACTGGAGGCATGCCTTGAAGCTGCTTGTGGAGTGTTAGAAAATGAAGCAAAGACATTGGAGCAAGAGGCTCATCCTGCCTTGGATAAATTGACTTCAAAAATCAGTACTCTCAACTTAGAACGTGTTCGTCAAATTAAAAGCCGCTTGGTTGCAATTACTGGTCGAGTTCAAAAGGTACGGGATGAGCTTGAACACTTGCTTGATGATGATGAGGATATGGCTGAGATGTATTTGACAGACAAGTTACAACAGCAGCTTGAGGATTCTTCAGCCTCATCCATGAATGATAAAGACGACATGGTAGATCAAGAACTTGAAACTGATACGGACGGCAGGATACCTGCTGAAATATCATTGGAAGCTGGTGGTGGTTCTGCTATCTATGATGATAATCAAAATACACTTGGCAGGGACAGCCATGGAACACGTACTAGCATGACCTACAGTACTGTAGCCAAGCAACTTGATGTAGAGGAGCTTGAGATGCTTTTGGAAGCATACTTCGTGCAAATTGATGGCACTCTGAACAAACTATCCACGCTGAGGGAGTACGTGGATGATACAGAGGACTACATCAATATCATGCTGGATGACAAGCAGAACCATCTGTTGCAAATGGGAGTGATGCTGACAACGGCAACTCTAGTGGTGAGTGCTTTTGTGGTGGTGGCTGGTATTTTTGGGATGAACATTCACATCGGACTTTTTGATGCTGGGATGCGTGAATTCCTTTGGACTGTTGGTGGCAGCACCGCCGGCACCATATTTTTGTACGTGTTTGCCATTGCTTGGTGTAAGCACAAACGCCTGCTGGAGTGA	1395	0.4652	MRANPRDPLKSANEDTPDGIRPSIPAAGINHRKKGTGVRAWLLIDATGQTQVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTVLGRERAIVINLEHIKAIITAHEVLLLNSRDPSVTPFVEEFQRRIMHHHQATKAQEGNGDDSNWTKLYDLEEPPSRTVSPRTPDEESKAEEKQFQNRDGMKVLPFEFVALEACLEAACGVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTDKLQQQLEDSSASSMNDKDDMVDQELETDTDGRIPAEISLEAGGGSAIYDDNQNTLGRDSHGTRTSMTYSTVAKQLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIGLFDAGMREFLWTVGGSTAGTIFLYVFAIAWCKHKRLLE	464

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi03g0365	464	Pfam	CorA-like Mg2+ transporter protein	350	454	IPR002523	GO:0016020\|GO:0030001\|GO:0046873\|GO:0055085
	Mibi03g0365	464	FunFam	Magnesium transporter MRS2-1	29	112	-	-
	Mibi03g0365	464	Coils	Coil	194	214	-	-
	Mibi03g0365	464	MobiDBLite	consensus disorder prediction	161	178	-	-
	Mibi03g0365	464	CDD	Mrs2_Mfm1p-like	41	462	IPR039204	-
	Mibi03g0365	464	PANTHER	RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL	29	463	IPR039204	-
	Mibi03g0365	464	MobiDBLite	consensus disorder prediction	1	27	-	-
	Mibi03g0365	464	MobiDBLite	consensus disorder prediction	132	178	-	-
	Mibi03g0365	464	Gene3D	Magnesium transport protein CorA, transmembrane region	167	395	-	-
	Mibi03g0365	464	Gene3D	-	29	112	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi03g0365	Mibi-ChrMibi03	4068222	4077555	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi03g0365	4	464	MRS2 Gene Family	AT3G19640	65.053	0.0	561