Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi03g0357 | ATGGCCAGTTTCGTGGGGACCACACAGAAGTGTACGGTGTGTGAAAAAACGGCATACCCCGTGGATAGGTTAGCCGCCGACAGCCGTGTATACCATAAGGCTTGTTTCCGATGCCACCATTGCCGGAATACCCTCAAGCTGAGCAACTATTGTTCATTTGAGGGGGTGCTATATTGCAGACCCCATTATGATCAACTCTACAAACGCACAGCTGGCAGCCTTAACGACAGCTTCGAAGGAACACCCAAGGTTCAAAAACCTGAAAAACAAACGGAGAATGAGAATGCGAAGATTCTCTCAAATGTGTTCTTGGGCACCAAAGACAAATGTGCAGGTTGCGAAAAGACAGTCTATCCCACTGAGAGGGTAACAGTGAATGGGACTGCATATCACAAAGGATGCTTCAAGTGCAGCCATGGAGGTTGTACCATAACATCAGCCAACTTCATCACTCACGAGGGAAAGCTTTACTGCAAGCACCATCACATTCAACTCTTCAAAGAAAAAGGCAATTACAGCCAGCTCGACGGCGACCGCCCCACCACTCCTCGCAAAGGAATCGACGATGCTCTGCAAGAAGGAGAGGCACAAGAAGTTTTTGATGAAGGAGGACAAGGTTGTAATGATGACTGTAGCTCAGTATGCGAATTAGAGGGTTCGATAGCTTCAGGCAATTCTTCTCCAACTTGTCATGAAAATGCTTCATGTTCATCTCCTCGCGACTTTGTTTCTAAATCTGATATGGATCAGCAGCTTGCAGCAGGGGAAGTTGTTAGTCCAAGAGTGAGTCTTTCATCAGAGAGAGAAAGGAAGAAGAAGAATAATAATAATAAAGACCCAAAGAAAGTGCTAGAGAAGCTGAGCTTTCAGCTGTTAGATAAAAATGGAAGGGTGATGCCAATACAAGTGAAATATAAGACTTCCGAGAAGAAAAAGAAGCAAGCTAGAAAGGAATCTGTTTTGGGAAAGAATATTGGTGGGTCTGTGAATGCATGA | 996 | 0.4498 | MASFVGTTQKCTVCEKTAYPVDRLAADSRVYHKACFRCHHCRNTLKLSNYCSFEGVLYCRPHYDQLYKRTAGSLNDSFEGTPKVQKPEKQTENENAKILSNVFLGTKDKCAGCEKTVYPTERVTVNGTAYHKGCFKCSHGGCTITSANFITHEGKLYCKHHHIQLFKEKGNYSQLDGDRPTTPRKGIDDALQEGEAQEVFDEGGQGCNDDCSSVCELEGSIASGNSSPTCHENASCSSPRDFVSKSDMDQQLAAGEVVSPRVSLSSERERKKKNNNNKDPKKVLEKLSFQLLDKNGRVMPIQVKYKTSEKKKKQARKESVLGKNIGGSVNA | 331 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi03g0357 | 331 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 37 | 71 | - | - | |
| Mibi03g0357 | 331 | Gene3D | Cysteine Rich Protein | 105 | 174 | - | - | |
| Mibi03g0357 | 331 | MobiDBLite | consensus disorder prediction | 263 | 283 | - | - | |
| Mibi03g0357 | 331 | MobiDBLite | consensus disorder prediction | 304 | 319 | - | - | |
| Mibi03g0357 | 331 | CDD | LIM2_SF3 | 110 | 170 | - | - | |
| Mibi03g0357 | 331 | MobiDBLite | consensus disorder prediction | 304 | 331 | - | - | |
| Mibi03g0357 | 331 | CDD | LIM1_SF3 | 7 | 69 | - | - | |
| Mibi03g0357 | 331 | FunFam | LIM domain and actin-binding 1 | 5 | 76 | - | - | |
| Mibi03g0357 | 331 | SMART | lim_4 | 109 | 161 | IPR001781 | - | |
| Mibi03g0357 | 331 | SMART | lim_4 | 10 | 62 | IPR001781 | - | |
| Mibi03g0357 | 331 | ProSitePatterns | LIM zinc-binding domain signature. | 11 | 45 | IPR001781 | - | |
| Mibi03g0357 | 331 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 102 | 135 | - | - | |
| Mibi03g0357 | 331 | Gene3D | Cysteine Rich Protein | 1 | 71 | - | - | |
| Mibi03g0357 | 331 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 3 | 36 | - | - | |
| Mibi03g0357 | 331 | ProSiteProfiles | LIM domain profile. | 108 | 168 | IPR001781 | - | |
| Mibi03g0357 | 331 | MobiDBLite | consensus disorder prediction | 253 | 283 | - | - | |
| Mibi03g0357 | 331 | ProSiteProfiles | LIM domain profile. | 9 | 69 | IPR001781 | - | |
| Mibi03g0357 | 331 | Pfam | LIM domain | 11 | 65 | IPR001781 | - | |
| Mibi03g0357 | 331 | Pfam | LIM domain | 110 | 165 | IPR001781 | - | |
| Mibi03g0357 | 331 | PANTHER | OS06G0237300 PROTEIN | 6 | 95 | IPR045268 | - | |
| Mibi03g0357 | 331 | FunFam | LIM domain and actin-binding 1 | 104 | 174 | - | - | |
| Mibi03g0357 | 331 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 136 | 175 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi03g0357 | Mibi-ChrMibi03 | 3978940 | 3983376 | Wgd |
Transcription factors information