Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0328 ATGAGTAGCAAAACCAATGAGCTAATGTGCCATGACAATACCTCAGAGCAGCTGCATACAATTGATCTGGGGACTACTCATTCTGAATTGCCAGAAAAAACTAATCAGATTGGATCTGAATCCATGGATAATGAACAAAGGGTTATTGGCACCAGGGAGACCACATCTCTTCTTGACAAAAAATCACCTTCAGGTGGTGTGATAGGGAATTCTGTTATTCAGCAACCTCAATGTGACTTAGACAAGAGTTGTCAAAATGAAGAAGGTTCAAGTTTTCAACATAATACTTTAGAACTGGGCAATGCTATTGGCATGGATGCTTCCTCAGATCACATGAGTAGTGAAACTAGAAAGTCAATGTGCCATATCAATAATACCTCAGAGCAGTTGCATACACTTGCTCCCACAACTGCTCATTTTAAAATGTCCGAGAAAATTAATCAGGCTGGTTCTGAATATTTGAACAATGAACAAAGAGTCCTAGGTACTGGGCAAACCAGCTCTCCTATTGACGGAAAACAACTTACAGTTTCTGCCAGTATGAATGGAGATTCTGCCATTCAATTGCCAACACAATCGCAATGTGACTTAGAAAATAGTTGTTGGAATGGAGGAAGTTCATGCTTTAAGCATAATACCATAGAACAGGTTTCTGGTTCTTTATCTAATGATGAATCCCAGAATAGACATCAGCAGGCCTCCTTAAATGCTCATAATGAACCTGTGGAAAGAAGTGGTGTGAATGAAAAATTAGAGCCACCTTCTCAAGACGCTTCCAAGGGCAGTAGTCCTAACAATTTGCAAAGAAACTCCAAATGGGCAACTCATGCCCGGTTAGGGGGCAAGGATAGAAGAACTACTGCATCATTGAAGAAAAAATATGTGCTAAGAAGTAGTGACAGAGTTTTGCGGTCAAGGATCCGTGAAAAACCTAAACCACCTGAATCAGACACTAATGTGGCTAAACCGGATCATGTTGGAGAACATAGAAGAAGAGGCAGGAAGAAGAAGAATAAGGGTAGAGGAAGGAGTGTGACTGATGAATATTCGAGAATCAGAGCGCGTCTAAGATATTTTATAAGTCGAGTGAGCTACGAGCAGAACTTGATTGATGCTTATTCTGCTGAGGGCTGGAAAGGATATAGCTTGGAGAAATTAAAGCCTGAGAAGGAGCTTCAACATGCTAAGTCTAAAATACTTGGTTTTAAATTGAAAATTAGGGATTTGTTTCGACATTTGGATACGTTGTGTGCTGAAGGGAGGCTTCCACAATCTTTGTTTGATTCTGAAGGAGAGATTTGCAGTGAGGATATATTTTGTGCAAAATGCAGGTCTAAAGACTTGACCACTGGTAATGATATAATACTTTGTGATGGTGCATGTGATCGTGGGTTTCACCAGTTCTGTTTGGAGCCTCCATTGTTATCTGAGAATATTCCACCTGATGATGAGGGTTGGCTTTGCCCGGGATGTGATTGCAAGGATGACTGTTTTGATCTCCTTAATGACAACTTCGGAACAAGCCTCTCTATTTGTGACTCCTGGGAGAGGGTATTTCCAGAGGCAGCCGCAGCTGCTGGAAATAAAGTAGATGACACCTTGGGACTTCCATCAGATGATTCTGATGATGGCGATTATAACCCTGATGTGGCAGAAGATAAAGAGGTTGAAGGAGGTGACTCAAGTTCTGATGAGTCTGAGGATGCTTCTACTTCTGAGAAAATGGAAGCTTCACGTAATAAGGATCCATATTTAGGCCTTCCTTCTGATGATTCTGAGGACAATGATTTTGATCCTGATGCTGTAGACCATGACAAAGACGTAGCTGAACAAAGTTCAAGTTCTGATTTCACGTCTGATTCTGAGGACCTCGCTGATGTAGTCAAGGGTAATGCATTATCTGGACAGGATAACAATACTGTACCTGCATCATCTTTGCCAGAGCTAGATCCTGGTGAAGAAGATTCCACTCCTGTTTCTGGGAAAAGACATATTGAAAGGTTGGACTACAAAAAATTGTATGATGAGGCCTACCAAAATGCTTCATCTGATTCCAGTGATGATGAAGATTGGACTGCTAGCCCTACTTCAAGTAGGAAAAAGAAAGTCTCTGGCAAAGGACTGCCAGTGTCACCAAATGGGAAAACCTCAACACGTGATCCTATGCAGAATGAAACTGAAAATACTCCTAGGAGTACTGCTCGTCCAAATAATGTTGAAAATATGGACAATTCACCCAGTAAATCACTTGAAGGCTCTAGGAGAGCTGGTTCAAATGACAAAAAACGAGGATCTTCAACTTACAAAAGACTTGGGGAAGATACAGTTAAGGTATTGCACAAAAACTTCAAAGAAAATCAGTACCCAGACCGTGCTTCAAAACAAAGCTTAGCGCAAGAACTTGGACTTACTTTCAATCAGGTTAGCAAATGGTTTGAGAATGCTCGTTGGAGCTCTCGGAATTCCTCACGTATGGAAGCCATGGCAAGGAAAAGTGCTTCTCGGGATGCCACTTCAAGCAGAGGTGAAAATGAGATAGCACCTGGTGATGAGAAGGGGGACTCAAAATCTGTGCCTCAGGAGGTGCATAATATACAGAAATCAAAACCCCAAAGTTCTAGAAAGAGGAGGCATAATGCAGATACTGAGGGAAATGATGCAAATATAAATATTGATAGTGCGGCAACAAATCCTCTTGTTGACTCACCTAGAGTTGAAGTGCAAAGAAATCAAAAAATGAAAACAAGGAAGAAAAAATAA 2760 0.4112 MSSKTNELMCHDNTSEQLHTIDLGTTHSELPEKTNQIGSESMDNEQRVIGTRETTSLLDKKSPSGGVIGNSVIQQPQCDLDKSCQNEEGSSFQHNTLELGNAIGMDASSDHMSSETRKSMCHINNTSEQLHTLAPTTAHFKMSEKINQAGSEYLNNEQRVLGTGQTSSPIDGKQLTVSASMNGDSAIQLPTQSQCDLENSCWNGGSSCFKHNTIEQVSGSLSNDESQNRHQQASLNAHNEPVERSGVNEKLEPPSQDASKGSSPNNLQRNSKWATHARLGGKDRRTTASLKKKYVLRSSDRVLRSRIREKPKPPESDTNVAKPDHVGEHRRRGRKKKNKGRGRSVTDEYSRIRARLRYFISRVSYEQNLIDAYSAEGWKGYSLEKLKPEKELQHAKSKILGFKLKIRDLFRHLDTLCAEGRLPQSLFDSEGEICSEDIFCAKCRSKDLTTGNDIILCDGACDRGFHQFCLEPPLLSENIPPDDEGWLCPGCDCKDDCFDLLNDNFGTSLSICDSWERVFPEAAAAAGNKVDDTLGLPSDDSDDGDYNPDVAEDKEVEGGDSSSDESEDASTSEKMEASRNKDPYLGLPSDDSEDNDFDPDAVDHDKDVAEQSSSSDFTSDSEDLADVVKGNALSGQDNNTVPASSLPELDPGEEDSTPVSGKRHIERLDYKKLYDEAYQNASSDSSDDEDWTASPTSSRKKKVSGKGLPVSPNGKTSTRDPMQNETENTPRSTARPNNVENMDNSPSKSLEGSRRAGSNDKKRGSSTYKRLGEDTVKVLHKNFKENQYPDRASKQSLAQELGLTFNQVSKWFENARWSSRNSSRMEAMARKSASRDATSSRGENEIAPGDEKGDSKSVPQEVHNIQKSKPQSSRKRRHNADTEGNDANINIDSAATNPLVDSPRVEVQRNQKMKTRKKK 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0328 919 ProSitePatterns Heat shock hsp70 proteins family signature 1. 21 28 IPR018181 -
Mibi03g0328 919 MobiDBLite consensus disorder prediction 255 273 - -
Mibi03g0328 919 ProSitePatterns Zinc finger PHD-type signature. 440 491 IPR019786 -
Mibi03g0328 919 Gene3D - 758 829 - -
Mibi03g0328 919 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 395 500 IPR013083 -
Mibi03g0328 919 MobiDBLite consensus disorder prediction 219 346 - -
Mibi03g0328 919 SMART HOX_1 764 826 IPR001356 GO:0003677
Mibi03g0328 919 Pfam Homeodomain 772 818 IPR001356 GO:0003677
Mibi03g0328 919 MobiDBLite consensus disorder prediction 812 841 - -
Mibi03g0328 919 MobiDBLite consensus disorder prediction 655 674 - -
Mibi03g0328 919 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 227 912 - -
Mibi03g0328 919 ProSiteProfiles 'Homeobox' domain profile. 762 822 IPR001356 GO:0003677
Mibi03g0328 919 CDD homeodomain 770 823 IPR001356 GO:0003677
Mibi03g0328 919 ProSiteProfiles Zinc finger PHD-type profile. 437 494 IPR019787 -
Mibi03g0328 919 SMART PHD_3 439 492 IPR001965 -
Mibi03g0328 919 FunFam Homeobox protein HAT3.1 420 496 - -
Mibi03g0328 919 MobiDBLite consensus disorder prediction 530 775 - -
Mibi03g0328 919 MobiDBLite consensus disorder prediction 812 919 - -
Mibi03g0328 919 SUPERFAMILY Homeodomain-like 763 826 IPR009057 -
Mibi03g0328 919 ProSitePatterns 'Homeobox' domain signature. 797 820 IPR017970 GO:0000981|GO:0006355
Mibi03g0328 919 MobiDBLite consensus disorder prediction 276 327 - -
Mibi03g0328 919 MobiDBLite consensus disorder prediction 754 775 - -
Mibi03g0328 919 Pfam PHD-finger 439 494 IPR019787 -
Mibi03g0328 919 CDD PHD_PRHA_like 439 491 IPR045876 -
Mibi03g0328 919 SUPERFAMILY FYVE/PHD zinc finger 429 497 IPR011011 -
Mibi03g0328 919 MobiDBLite consensus disorder prediction 710 753 - -
Mibi03g0328 919 MobiDBLite consensus disorder prediction 678 701 - -
Mibi03g0328 919 MobiDBLite consensus disorder prediction 219 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0328 Mibi-ChrMibi03 3650645 3654854 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0328 238 877 Homeobox Transcription Factor Family AT3G19510 41.800 2.26e-127 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Mibi03g0328 PHD 8.6e-11 CL0390