Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0312 ATGAATTCTGATTCTGCAGCAATGGAGGATGATCAACAGAGAGAAGTGGATCGTGTGAAAGGACCATGGAGTCCAGAAGAAGACGAGTCATTACGGAAGCTTGTACAACGGTACGGACCTCGGAACTGGTCAACAATAAGCAAATCAATACCAGGAAGGTCCGGCAAATCTTGCCGTCTCCGGTGGTGTAACCAGCTCTCGCCGGACGTAGAACACCGGTCGTTCACACCGGAGGAAGACGACATCATCATCAAGGCTCACTCAAAGTTCGGTAACCGTTGGGCCACCATAGCTAGGCTTCTCAACGGCCGTACGGACAACGCGATCAAGAATCACTGGAACTCTACCTTGAAACGGAAGTACTCTTCGTTGATCGGCGACGAACGTTGTTCGATTGACGGTCCGCCGGAGAAGAAGCAGGCGATCGTCGCACGTGCCGTGCCGTTACAGTCGTTACCGCCTGGAAGCCATTGTTATAGTCCGAGTAGTCAATCTGGATCTGATGTTAGTGATTCTGGTCTTCCTATTGTAGCGAGAAATTGCGGAGTATTGGTTCCTTTTCAGAAGGTTGAATCACGTAGTTTGAGTCCGAAGTTTGATGTGAACAACGGACCTTGCACTGATCTTACTCTGGGTGGAGGAGGAGGAGGAGGAGGTGAATTATTGAAGGAGGAGACGAAGAAGAAGATTCAGAGTGTTGATTATTCTAGGGCAGAGGTACGGACGGAGTCTGAGAAATTGTCTACAATGGCTTCGTTTGGGCCTGATTTATTGAAGGTTATGAGGGAGATGATTAAGGATGAAGTGAGGAATTACATGGCGGAACGTAATGATAGATTGTGCTCTAAACCTGATGATGATGATGATGATGATGATGTGTGA 882 0.4807 MNSDSAAMEDDQQREVDRVKGPWSPEEDESLRKLVQRYGPRNWSTISKSIPGRSGKSCRLRWCNQLSPDVEHRSFTPEEDDIIIKAHSKFGNRWATIARLLNGRTDNAIKNHWNSTLKRKYSSLIGDERCSIDGPPEKKQAIVARAVPLQSLPPGSHCYSPSSQSGSDVSDSGLPIVARNCGVLVPFQKVESRSLSPKFDVNNGPCTDLTLGGGGGGGGELLKEETKKKIQSVDYSRAEVRTESEKLSTMASFGPDLLKVMREMIKDEVRNYMAERNDRLCSKPDDDDDDDDV 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0312 293 Gene3D - 19 71 - -
Mibi03g0312 293 MobiDBLite consensus disorder prediction 1 30 - -
Mibi03g0312 293 Gene3D - 74 120 - -
Mibi03g0312 293 ProSiteProfiles Myb-like domain profile. 15 66 IPR001005 -
Mibi03g0312 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 70 IPR017930 -
Mibi03g0312 293 PANTHER MYB PROTEIN-RELATED 20 192 - -
Mibi03g0312 293 FunFam MYB transcription factor 20 71 - -
Mibi03g0312 293 SUPERFAMILY Homeodomain-like 17 113 IPR009057 -
Mibi03g0312 293 SMART sant 19 68 IPR001005 -
Mibi03g0312 293 SMART sant 71 119 IPR001005 -
Mibi03g0312 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 121 IPR017930 -
Mibi03g0312 293 CDD SANT 22 64 IPR001005 -
Mibi03g0312 293 Pfam Myb-like DNA-binding domain 74 116 IPR001005 -
Mibi03g0312 293 Pfam Myb-like DNA-binding domain 20 66 IPR001005 -
Mibi03g0312 293 CDD SANT 74 117 IPR001005 -
Mibi03g0312 293 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Mibi03g0312 293 MobiDBLite consensus disorder prediction 8 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0312 Mibi-ChrMibi03 3505186 3506067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0312 16 275 MYB Transcription Factor Family AT5G67300 46.552 7.24e-68 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi03g0312 Myb_DNA-binding 2.9e-17 CL0123